#!/bin/bash
set -e

pkg="amap-align"

if [ "$AUTOPKGTEST_TMP" = "" ] ; then
  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
  trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
fi

cp -a /usr/share/doc/${pkg}/examples/* $AUTOPKGTEST_TMP

cd $AUTOPKGTEST_TMP
find . -name "*.gz" -exec gunzip \{\} \;

/usr/bin/amap BB12020.tfa > 1.out
/usr/bin/amap -clustalw BB12020.tfa > 2.out
/usr/bin/amap -viterbi BB12020.tfa > 3.out
/usr/bin/amap -pairs BB12020.tfa > 4.out
/usr/bin/amap -prog BB12020.tfa > 5.out
/usr/bin/amap -noreorder BB12020.tfa > 6.out
/usr/bin/amap -gui BB12020.tfa > 7.out

echo "PASS"
