2011-12-20 14:23  sloot

	* [r13733] NEWS, docs/timbl.1, include/timbl/LogBuffer.h,
	  include/timbl/LogStream.h, src/IBtree.cxx, src/LogStream.cxx,
	  src/TRIBLExperiments.cxx, src/Testers.cxx, src/Timbl.cxx,
	  src/TimblExperiment.cxx: treshold ==> threshold

2011-12-20 11:51  sloot

	* [r13727] NEWS, src/Instance.cxx, src/TimblExperiment.cxx: get
	  ready for release:
	  - Some final cleanup
	  - NEWS updated

2011-12-14 10:44  sloot

	* [r13696] include/timbl/LogBuffer.h, include/timbl/LogStream.h,
	  src/LogBuffer.cxx, src/LogStream.cxx, src/Makefile.am: Major
	  cleanup. There was a lot of dead code.

2011-12-13 16:25  sloot

	* [r13691] NEWS, include/timbl/LogBuffer.h, src/LogBuffer.cxx,
	  src/LogStream.cxx: fixed a small and anoying problem in
	  LogBuffer/LogStream
	  
	  ATTENTION!!!!!
	  ALL Dependencies have to be recompiled! especialy TimblServer and
	  MbtServer!
	  ATTENTION!!!!!

2011-12-01 13:01  sloot

	* [r13624] src/TimblExperiment.cxx: try to be smarter

2011-12-01 10:06  sloot

	* [r13622] src/Instance.cxx, src/MBLClass.cxx,
	  src/TimblExperiment.cxx: weeding out some old stuff to speed-up
	  clones.
	  more can be done, I think.

2011-10-31 11:48  sloot

	* [r13492] NEWS, src/neighborSet.cxx: fixed bug89

2011-10-27 15:21  sloot

	* [r13480] include/timbl/BestArray.h, src/BestArray.cxx: removed
	  unused function

2011-10-25 12:38  sloot

	* [r13456] NEWS: NEWS

2011-10-25 12:26  sloot

	* [r13454] include/timbl/TimblAPI.h, src/Common.cxx: made it
	  "-pedantic proof" again.

2011-09-22 15:21  sloot

	* [r13267] NEWS, src/Instance.cxx: (again) fixed bug 43. Now
	  according to the last insights

2011-09-19 15:08  sloot

	* [r13236] timbl.pc.in: attempt to stop:
	  dpkg-shlibdeps: warning: dependency on libxml2.so.2 could be
	  avoided if "debian/timbl/usr/bin/timbl" were not
	  uselessly linked against it (they use none of its symbols).
	  
	  for libgomp the situation is unclear to me

2011-09-19 15:06  sloot

	* [r13235] src/simpletest.cxx: removed unneeded include

2011-09-13 12:18  sloot

	* [r13150] src, src/Makefile.am, src/simpletest.cxx: added a test.
	  'make check' and 'make distcheck' now work

2011-09-12 08:41  sloot

	* [r13135] NEWS, docs/timbl.1, src/GetOptClass.cxx, src/Timbl.cxx:
	  changed option -Tn to --Treeorder=n

2011-08-31 14:01  sloot

	* [r13052] docs/timbl.1, include/timbl/TimblExperiment.h,
	  include/timbl/Types.h, src/GetOptClass.cxx,
	  src/LOOExperiment.cxx, src/Timbl.cxx, src/TimblExperiment.cxx,
	  src/Types.cxx: add a confidence field to the output file. Only
	  when -G applies.

2011-08-31 12:31  sloot

	* [r13048] m4/acx_pthread.m4: make sure to use the same compiler as
	  specified in configure.ac

2011-08-31 08:18  sloot

	* [r13039] configure.ac: Bumped version after Release

2011-08-25 09:24  sloot

	* [r12971] AUTHORS, NEWS: stil not released

2011-08-25 08:09  sloot

	* [r12970] include/timbl/TimblAPI.h: avaid multiple definition of
	  `Timbl::VersionName()' errors

2011-08-24 14:00  sloot

	* [r12969] include/timbl/Common.h, include/timbl/TimblAPI.h,
	  src/Common.cxx, src/Timbl.cxx, src/TimblAPI.cxx: attempt to fix
	  dependency of TimblAPI on config.h

2011-08-24 09:29  sloot

	* [r12961] NEWS: get ready for release

2011-08-11 14:39  sloot

	* [r12865] src/Instance.cxx: fixed Randomized Tie resolution, and
	  then unfixed. Depends on reopened bug43

2011-08-11 12:19  sloot

	* [r12857] src/MBLClass.cxx: make this Warning an Error.

2011-08-10 14:19  sloot

	* [r12843] src/XMLtools.cxx: smarter serialization

2011-08-01 09:52  sloot

	* [r12767] NEWS, include/timbl/TimblExperiment.h,
	  src/TimblExperiment.cxx: Expand is enabled for TRIBL and TRIBL2
	  too, why not.

2011-06-10 12:27  sloot

	* [r10522] NEWS: NEWS!

2011-06-10 11:08  sloot

	* [r10513] demos/classify.cxx, src/IGExperiment.cxx,
	  src/LOOExperiment.cxx, src/TimblExperiment.cxx: fixed problem
	  with "+vS" option. It was ingnored on several occasions

2011-05-16 12:24  sloot

	* [r9987] docs/timbl.1: updated man page

2011-05-16 12:10  sloot

	* [r9986] NEWS, src/Timbl.cxx: modified usage()
	  updated NEWS

2011-05-16 11:13  sloot

	* [r9981] include/timbl/Instance.h, include/timbl/Types.h,
	  src/Instance.cxx, src/TimblExperiment.cxx, src/Types.cxx: added a
	  logarithmic Probability normalisation option.
	  First take the logarithm of all weights, then normalize.
	  This smoothens the peaks

2011-05-12 11:34  sloot

	* [r9894] NEWS, include/timbl/Instance.h, src/Instance.cxx: added a
	  Confidence( class ) function

2011-05-12 08:49  sloot

	* [r9879] NEWS, src/TimblExperiment.cxx: don't try to normalize
	  missing distributions

2011-04-28 13:13  sloot

	* [r9746] src/MBLClass.cxx: Lift the ban on singleton warnings for
	  Sparse and SparseBinary.
	  Maybe a bit verbose voor large N

2011-04-07 10:07  sloot

	* [r9315] NEWS, include/timbl/TimblAPI.h, src/TimblAPI.cxx: - added
	  Version() and VersionName() functions
	  - updated NEWS

2011-03-29 12:00  sloot

	* [r9208] configure.ac, src: Bumped version after Releas
	  props set

2011-03-23 10:50  sloot

	* [r9082] demos/dimin.script: 1 forgotten

2011-03-23 09:20  sloot

	* [r9072] demos/api_test1.cxx, demos/api_test2.cxx,
	  demos/api_test3.cxx, demos/api_test4.cxx, demos/api_test5.cxx,
	  demos/api_test6.cxx, demos/classify.cxx, demos/tse.cxx,
	  include/timbl/BestArray.h, include/timbl/Choppers.h,
	  include/timbl/CommandLine.h, include/timbl/Common.h,
	  include/timbl/GetOptClass.h, include/timbl/IBtree.h,
	  include/timbl/Instance.h, include/timbl/LogBuffer.h,
	  include/timbl/LogStream.h, include/timbl/MBLClass.h,
	  include/timbl/Matrices.h, include/timbl/Metrics.h,
	  include/timbl/MsgClass.h, include/timbl/Options.h,
	  include/timbl/Statistics.h, include/timbl/StringOps.h,
	  include/timbl/Testers.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, include/timbl/Tree.h,
	  include/timbl/Trie.h, include/timbl/Types.h,
	  include/timbl/XMLtools.h, include/timbl/neighborSet.h,
	  src/BestArray.cxx, src/CVExperiment.cxx, src/Choppers.cxx,
	  src/CommandLine.cxx, src/Common.cxx, src/GetOptClass.cxx,
	  src/IBprocs.cxx, src/IBtree.cxx, src/IGExperiment.cxx,
	  src/Instance.cxx, src/LOOExperiment.cxx, src/LogBuffer.cxx,
	  src/LogStream.cxx, src/MBLClass.cxx, src/Metrics.cxx,
	  src/MsgClass.cxx, src/Statistics.cxx, src/StringOps.cxx,
	  src/TRIBLExperiments.cxx, src/Testers.cxx, src/Timbl.cxx,
	  src/TimblAPI.cxx, src/TimblExperiment.cxx, src/Tree.cxx,
	  src/Types.cxx, src/XMLtools.cxx, src/neighborSet.cxx: CliPS ==>
	  CLiPS

2011-03-23 09:12  sloot

	* [r9070] include/timbl/BestArray.h, include/timbl/Choppers.h,
	  include/timbl/CommandLine.h, include/timbl/Common.h,
	  include/timbl/GetOptClass.h, include/timbl/IBtree.h,
	  include/timbl/Instance.h, include/timbl/LogBuffer.h,
	  include/timbl/LogStream.h, include/timbl/MBLClass.h,
	  include/timbl/Matrices.h, include/timbl/Metrics.h,
	  include/timbl/MsgClass.h, include/timbl/Options.h,
	  include/timbl/Statistics.h, include/timbl/StringOps.h,
	  include/timbl/Testers.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, include/timbl/Tree.h,
	  include/timbl/Trie.h, include/timbl/Types.h,
	  include/timbl/XMLtools.h, include/timbl/neighborSet.h: CNTS ==>
	  CliPS

2011-03-23 09:09  sloot

	* [r9069] README, demos/api_test1.cxx, demos/api_test2.cxx,
	  demos/api_test3.cxx, demos/api_test4.cxx, demos/api_test5.cxx,
	  demos/api_test6.cxx, demos/classify.cxx, demos/tse.cxx,
	  include/timbl/BestArray.h, include/timbl/Choppers.h,
	  include/timbl/CommandLine.h, include/timbl/Common.h,
	  include/timbl/GetOptClass.h, include/timbl/IBtree.h,
	  include/timbl/Instance.h, include/timbl/LogBuffer.h,
	  include/timbl/LogStream.h, include/timbl/MBLClass.h,
	  include/timbl/Matrices.h, include/timbl/Metrics.h,
	  include/timbl/MsgClass.h, include/timbl/Options.h,
	  include/timbl/Statistics.h, include/timbl/StringOps.h,
	  include/timbl/Testers.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, include/timbl/Tree.h,
	  include/timbl/Trie.h, include/timbl/Types.h,
	  include/timbl/XMLtools.h, include/timbl/neighborSet.h,
	  src/BestArray.cxx, src/CVExperiment.cxx, src/Choppers.cxx,
	  src/CommandLine.cxx, src/Common.cxx, src/GetOptClass.cxx,
	  src/IBprocs.cxx, src/IBtree.cxx, src/IGExperiment.cxx,
	  src/Instance.cxx, src/LOOExperiment.cxx, src/LogBuffer.cxx,
	  src/LogStream.cxx, src/MBLClass.cxx, src/Metrics.cxx,
	  src/MsgClass.cxx, src/Statistics.cxx, src/StringOps.cxx,
	  src/TRIBLExperiments.cxx, src/Testers.cxx, src/Timbl.cxx,
	  src/TimblAPI.cxx, src/TimblExperiment.cxx, src/Tree.cxx,
	  src/Types.cxx, src/XMLtools.cxx, src/neighborSet.cxx: A lot more
	  decapping, in usage() and copyright parts

2011-03-21 11:19  sloot

	* [r8993] docs/Makefile.am, docs/Timbl.1, docs/timbl.1: decapped
	  'man' page too

2011-03-21 10:46  sloot

	* [r8990] timblserver.pc.in: removed unwanted file

2011-03-21 10:37  sloot

	* [r8989] NEWS, configure.ac, demos/Makefile.am, src/Makefile.am,
	  timbl.pc.in: Started decapping the Timbl family.
	  Bumped version to 6.4.0

2011-03-16 13:19  sloot

	* [r8874] include/timbl/Instance.h, src/Choppers.cxx,
	  src/Instance.cxx: now we survive -pedeantic

2011-03-14 15:22  sloot

	* [r8855] src/Timbl.cxx: nog beter

2011-03-14 15:08  sloot

	* [r8854] src/Timbl.cxx: fixed expanding. I hope…

2011-03-14 13:55  sloot

	* [r8851] src/TimblExperiment.cxx: fixed IB2 expaned problem
	  small fixes to stop the compiler from wining

2011-03-10 14:41  sloot

	* [r8774] NEWS: more News

2011-03-10 14:09  sloot

	* [r8771] include/timbl/TimblExperiment.h, src/MBLClass.cxx,
	  src/Timbl.cxx: cleaner errors

2011-03-10 13:40  sloot

	* [r8770] include/timbl/TimblExperiment.h, src/CVExperiment.cxx,
	  src/Timbl.cxx, src/TimblExperiment.cxx: Added the possibility to
	  expand instancebases using the Timbl command.
	  Just do something like:
	  Timbl -f inputfile -i treefile -I newtreefile
	  this wil append the instances from 'inputfile' to the
	  instancebase 'treefile'
	  and creates a new instancebase file 'newtreefile'

2011-03-10 11:06  sloot

	* [r8769] include/timbl/TimblAPI.h, src/TimblAPI.cxx: added a
	  function to the API

2011-03-08 10:01  sloot

	* [r8741] docs/Timbl.1: up'date'etd

2011-03-08 09:54  sloot

	* [r8740] docs/Timbl.1: updated man page

2011-03-08 09:49  sloot

	* [r8739] include/timbl/TimblAPI.h, src/Timbl.cxx: updated usage

2011-03-08 09:48  sloot

	* [r8738] NEWS: added news

2011-03-07 15:33  sloot

	* [r8724] src/Timbl.cxx: solution for bug58
	  Refuse to read an instancebase without a testfile

2011-03-07 14:05  sloot

	* [r8717] include/timbl/TimblExperiment.h, src/CVExperiment.cxx,
	  src/IGExperiment.cxx, src/TimblExperiment.cxx: attempt to fix
	  bug61

2011-03-07 11:38  sloot

	* [r8710] include/timbl/TimblExperiment.h, src/TimblExperiment.cxx:
	  for now, we use the original --clones implementation.

2011-03-03 14:39  sloot

	* [r8675] include/timbl/TimblExperiment.h, src/TimblExperiment.cxx:
	  next OpenMp attempt

2011-03-02 16:53  sloot

	* [r8654] src/TimblExperiment.cxx: another OpenMP attempt

2011-02-28 11:21  sloot

	* [r8607] acinclude.m4, configure.ac: deleted unneeded file
	  cleanup in configure.ac (not quite sure…)

2011-02-28 10:16  sloot

	* [r8606] configure.ac, timbl.pc.in: sort of fixed openmp stuff in
	  timbl.pc

2011-02-17 16:40  sloot

	* [r8374] m4/openmp.m4: needed!

2011-02-17 16:19  sloot

	* [r8373] configure.ac: hmm, lets bump

2011-02-17 16:15  sloot

	* [r8372] configure.ac, include/timbl/GetOptClass.h,
	  include/timbl/TimblExperiment.h, src/GetOptClass.cxx,
	  src/IBtree.cxx, src/IGExperiment.cxx, src/LOOExperiment.cxx,
	  src/TRIBLExperiments.cxx, src/TimblExperiment.cxx: added
	  multithreaded testing (still experimental)
	  Use --clones=<n> to to experiment

2011-02-17 09:16  sloot

	* [r8363] include/timbl/MBLClass.h, src/MBLClass.cxx: made better
	  MT resistant

2011-02-16 15:35  sloot

	* [r8361] include/timbl/Statistics.h: headet too!

2011-02-16 15:34  sloot

	* [r8360] src/Statistics.cxx: added some usefull functions for
	  multithreading support

2011-02-15 09:48  sloot

	* [r8330] src/MBLClass.cxx: throwing strings is not very clean

2011-02-10 16:50  sloot

	* [r8290] src/MBLClass.cxx: hmm. an experiment was commit. Revert!

2011-02-10 11:58  sloot

	* [r8282] src/Instance.cxx: typo

2011-02-10 11:57  sloot

	* [r8281] src/MBLClass.cxx: humiliating this bug is

2011-02-10 11:07  sloot

	* [r8278] src/MBLClass.cxx: This hardly ever went wrong, but why
	  not be sure to catch problems>

2011-02-10 10:22  sloot

	* [r8277] src/MBLClass.cxx: oeps. when copying all, please copy all

2011-02-02 15:18  sloot

	* [r8193] ., m4: props set

2011-02-02 14:50  sloot

	* [r8191] include/Makefile.am, include/timbl/BestArray.h,
	  include/timbl/Choppers.h, include/timbl/CommandLine.h,
	  include/timbl/Common.h, include/timbl/GetOptClass.h,
	  include/timbl/IBtree.h, include/timbl/Instance.h,
	  include/timbl/LogBuffer.h, include/timbl/LogStream.h,
	  include/timbl/MBLClass.h, include/timbl/Makefile.am,
	  include/timbl/Matrices.h, include/timbl/Metrics.h,
	  include/timbl/MsgClass.h, include/timbl/Options.h,
	  include/timbl/Statistics.h, include/timbl/StringOps.h,
	  include/timbl/Testers.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, include/timbl/Tree.h,
	  include/timbl/Trie.h, include/timbl/Types.h,
	  include/timbl/XMLtools.h, include/timbl/neighborSet.h,
	  src/BestArray.cxx, src/CVExperiment.cxx, src/Choppers.cxx,
	  src/CommandLine.cxx, src/Common.cxx, src/GetOptClass.cxx,
	  src/IBprocs.cxx, src/IBtree.cxx, src/IGExperiment.cxx,
	  src/Instance.cxx, src/LOOExperiment.cxx, src/LogBuffer.cxx,
	  src/LogStream.cxx, src/MBLClass.cxx, src/Makefile.am,
	  src/Metrics.cxx, src/MsgClass.cxx, src/Statistics.cxx,
	  src/StringOps.cxx, src/TRIBLExperiments.cxx, src/Testers.cxx,
	  src/Timbl.cxx, src/TimblAPI.cxx, src/TimblExperiment.cxx,
	  src/Tree.cxx, src/Types.cxx, src/XMLtools.cxx,
	  src/neighborSet.cxx: tags and props

2011-02-02 13:55  sloot

	* [r8178] demos/api_test1.cxx, demos/api_test2.cxx,
	  demos/api_test3.cxx, demos/api_test4.cxx, demos/api_test5.cxx,
	  demos/api_test6.cxx, demos/classify.cxx, demos/tse.cxx,
	  src/Timbl.cxx: more 2011

2011-02-02 13:48  sloot

	* [r8176] README, include/timbl/BestArray.h,
	  include/timbl/Choppers.h, include/timbl/CommandLine.h,
	  include/timbl/Common.h, include/timbl/GetOptClass.h,
	  include/timbl/IBtree.h, include/timbl/Instance.h,
	  include/timbl/LogBuffer.h, include/timbl/LogStream.h,
	  include/timbl/MBLClass.h, include/timbl/Matrices.h,
	  include/timbl/Metrics.h, include/timbl/MsgClass.h,
	  include/timbl/Options.h, include/timbl/Statistics.h,
	  include/timbl/StringOps.h, include/timbl/Testers.h,
	  include/timbl/TimblAPI.h, include/timbl/TimblExperiment.h,
	  include/timbl/Tree.h, include/timbl/Trie.h,
	  include/timbl/Types.h, include/timbl/XMLtools.h,
	  include/timbl/neighborSet.h, src/BestArray.cxx,
	  src/CVExperiment.cxx, src/Choppers.cxx, src/CommandLine.cxx,
	  src/Common.cxx, src/GetOptClass.cxx, src/IBprocs.cxx,
	  src/IBtree.cxx, src/IGExperiment.cxx, src/Instance.cxx,
	  src/LOOExperiment.cxx, src/LogBuffer.cxx, src/LogStream.cxx,
	  src/MBLClass.cxx, src/Metrics.cxx, src/MsgClass.cxx,
	  src/Statistics.cxx, src/StringOps.cxx, src/TRIBLExperiments.cxx,
	  src/Testers.cxx, src/Timbl.cxx, src/TimblAPI.cxx,
	  src/TimblExperiment.cxx, src/Tree.cxx, src/Types.cxx,
	  src/XMLtools.cxx, src/neighborSet.cxx: 2011

2011-01-25 15:04  sloot

	* [r7995] src/MBLClass.cxx, src/Timbl.cxx: hmm, toch maar iets
	  anders organiseren ivm backward compatibility

2011-01-25 14:45  sloot

	* [r7994] include/timbl/MBLClass.h, include/timbl/TimblAPI.h,
	  src/Timbl.cxx, src/TimblAPI.cxx: added isValid() to API. Does
	  same as Valid() but without printing messages

2011-01-25 14:03  sloot

	* [r7992] src/MBLClass.cxx, src/Timbl.cxx: bail out on weighting
	  problem

2011-01-25 11:19  sloot

	* [r7986] src/MBLClass.cxx: put a lower limit to the number of NN.
	  Timbl would run out of memory, for 'unreasonable' values

2011-01-13 11:03  sloot

	* [r7800] configure.ac: bump version after release

2011-01-06 10:43  sloot

	* [r7722] NEWS: Updated the News

2011-01-05 13:47  sloot

	* [r7708] ChangeLog, Makefile.am: ChangeLog no longer in SVN

2011-01-05 10:40  sloot

	* [r7697] src/MBLClass.cxx: Attempt to give a more helpfull
	  errormessage ehen -mD breaks

2011-01-04 14:58  sloot

	* [r7689] include/timbl/Metrics.h, src/Metrics.cxx: reverted last
	  bugfix. Some refactoring too, to avoid needless compilations

2011-01-04 14:21  sloot

	* [r7685] src/MBLClass.cxx: better formatting of fatal errors

2011-01-04 14:13  sloot

	* [r7684] include/timbl/Metrics.h: fix bug47

2011-01-04 14:13  sloot

	* [r7683] src/Testers.cxx: some more debugging lines

2011-01-03 17:00  sloot

	* [r7671] src/GetOptClass.cxx: fixed bug 45

2011-01-03 16:19  sloot

	* [r7663] src/BestArray.cxx: send better info to the user

2011-01-03 14:36  sloot

	* [r7652] src/LOOExperiment.cxx, src/TRIBLExperiments.cxx,
	  src/TimblExperiment.cxx: use refactored Chopper output. Now we
	  can add Exact matches

2011-01-03 14:35  sloot

	* [r7651] include/timbl/MBLClass.h, src/MBLClass.cxx: refactored
	  chopper output

2011-01-03 14:32  sloot

	* [r7650] include/timbl/Choppers.h, src/Choppers.cxx: cleaner
	  solution

2011-01-03 13:47  sloot

	* [r7648] include/timbl/Instance.h: const correctness

2010-12-23 11:14  sloot

	* [r7575] src/TRIBLExperiments.cxx, src/TimblExperiment.cxx: fixing
	  the fix

2010-12-23 10:25  sloot

	* [r7574] src/TRIBLExperiments.cxx, src/TimblExperiment.cxx: fixed
	  bug44 also for (not yet detected problems with ) TRIBL too.

2010-12-23 10:18  sloot

	* [r7573] AUTHORS: added contributor

2010-12-21 16:43  sloot

	* [r7554] src/TimblExperiment.cxx: fix for bug44
	  testing in progress.
	  In some corner cases, output is changed a bit...

2010-12-21 16:42  sloot

	* [r7553] src/MBLClass.cxx: moved BestArray initialization to
	  TimblExperiment.cxx

2010-12-21 16:18  sloot

	* [r7551] include/timbl/BestArray.h, src/BestArray.cxx: added
	  output operator

2010-12-14 10:31  sloot

	* [r7392] docs/Timbl.1: added missing option

2010-12-14 10:00  sloot

	* [r7391] src/Instance.cxx: fix bug43: testing with -R can never
	  lead to a tie

2010-12-12 16:28  joostvb

	* [r7315] m4/pkg.m4: this file does not belong in svn

2010-12-12 16:26  joostvb

	* [r7314] debian, m4/pkg.m4: debian packaging now maintained at
	  svn+ssh://svn.debian.org/svn/debian-science/packages/timbl/trunk/debian

2010-12-09 11:09  sloot

	* [r7235] debian/README.devel: some additions

2010-12-09 11:09  sloot

	* [r7234] configure.ac: bumped version after release

2010-12-08 12:37  sloot

	* [r7215] debian/NEWS.Debian: version naming fixed

2010-12-08 11:48  sloot

	* [r7207] debian/changelog: Building packages

2010-12-08 10:03  sloot

	* [r7192] debian/NEWS.Debian: release 6.3.1

2010-12-06 14:17  sloot

	* [r7151] include/timbl/IndexClass.h, include/timbl/Makefile.am,
	  include/timbl/XMLtools.h, src/XMLtools.cxx: IndexClass was not
	  used
	  added Copyright messages

2010-12-06 14:10  sloot

	* [r7148] include/timbl/StringOps.h, src/StringOps.cxx: added
	  usefull debugging function
	  some reformatting

2010-12-01 14:52  sloot

	* [r7083] configure.ac: fixed problem with replacing g++ by gcc on
	  mac

2010-12-01 13:56  sloot

	* [r7074] m4/acx_pthread.m4: make Mac happy (i hope)

2010-11-30 17:26  sloot

	* [r7065] src/MBLClass.cxx: fixed bug42
	  testing in progresss

2010-11-24 16:14  sloot

	* [r7012] docs/Timbl.1: another omission

2010-11-24 15:13  sloot

	* [r7011] docs/Timbl.1: added Jensen-Shannon divergence.
	  small layout fixes

2010-11-24 14:37  antalb

	* [r7009] docs/Timbl.1: updated TiMBL man page without actually
	  checking nroff syntax

2010-11-18 14:26  sloot

	* [r6935] configure.ac: grumbl. pthreads are everywhere

2010-11-17 16:23  sloot

	* [r6916] docs/Timbl.man, docs/Timbl_6.1_API.pdf,
	  docs/Timbl_6.1_Manual.pdf, docs/Timbl_6.2_API.pdf,
	  docs/Timbl_6.2_Manual.pdf, docs/Timbl_6.3_API.pdf,
	  docs/Timbl_6.3_Manual.pdf: deleted al pdf's HAH

2010-11-17 14:26  sloot

	* [r6900] ChangeLog, include/timbl/LogBuffer.h,
	  include/timbl/LogStream.h, src/LogBuffer.cxx, src/LogStream.cxx:
	  re-instated LogStream stuff

2010-11-17 13:31  sloot

	* [r6899] ChangeLog, NEWS, include/timbl/Makefile.am,
	  src/Makefile.am: updated NEWS
	  LogStreams are back in from TimblServer

2010-11-17 10:48  sloot

	* [r6895] docs/Makefile.am, docs/Timbl.1: now we provide a man page

2010-11-16 13:57  sloot

	* [r6891] .cvsignore, demos/.cvsignore, docs/.cvsignore,
	  include/.cvsignore, src/.cvsignore: old stuff removed

2010-11-16 13:54  sloot

	* [r6889] include/timbl/GetOptClass.h, include/timbl/MBLClass.h,
	  include/timbl/Makefile.am, include/timbl/NewIBtree.h,
	  include/timbl/TimblExperiment.h, src/GetOptClass.cxx,
	  src/IBprocs.cxx, src/IGExperiment.cxx, src/MBLClass.cxx,
	  src/Makefile.am, src/NewIBtree.cxx, src/TRIBLExperiments.cxx,
	  src/TimblExperiment.cxx: removed NewIBTree and --speedtraining
	  from the trunk

2010-11-11 15:13  sloot

	* [r6823] TODO: todo

2010-11-02 13:15  sloot

	* [r6720] include/timbl/Instance.h, src/Instance.cxx: added output
	  method

2010-11-02 10:36  sloot

	* [r6719] include/timbl/NewIBtree.h, src/NewIBtree.cxx: some
	  rewriting. should make extensions simpler

2010-11-01 16:18  sloot

	* [r6713] include/timbl/NewIBtree.h, src/NewIBtree.cxx: some
	  cleanup

2010-11-01 13:36  sloot

	* [r6712] include/timbl/NewIBtree.h, src/NewIBtree.cxx: more
	  generic

2010-10-28 12:22  sloot

	* [r6696] include/timbl/Types.h: added convenient output hack

2010-10-28 09:21  sloot

	* [r6693] src/GetOptClass.cxx: arggh

2010-10-28 09:14  sloot

	* [r6692] src/GetOptClass.cxx: hmpff. -s was verbokt

2010-10-27 09:37  sloot

	* [r6685] src/GetOptClass.cxx: be as clear as possible when someone
	  (ab)uses the manyfold timbl options

2010-10-26 15:41  sloot

	* [r6680] include/timbl/CommandLine.h, include/timbl/TimblAPI.h,
	  src/CommandLine.cxx, src/GetOptClass.cxx, src/Timbl.cxx,
	  src/TimblAPI.cxx: attempt to simplify command line parsing.
	  should'nt we switch to some standard tool?

2010-10-25 13:46  sloot

	* [r6616] src/GetOptClass.cxx: oesp

2010-10-25 13:34  sloot

	* [r6614] src/GetOptClass.cxx: test2

2010-10-21 14:24  sloot

	* [r6559] src/NewIBtree.cxx: fix TRIBL problems (slow)

2010-10-21 11:10  sloot

	* [r6556] include/timbl/NewIBtree.h, src/NewIBtree.cxx: some fixes
	  and polishing

2010-10-21 11:09  sloot

	* [r6555] src/TimblExperiment.cxx: support NewIB stuff

2010-10-21 11:09  sloot

	* [r6554] src/IBtree.cxx: some debug lines added

2010-10-14 13:06  sloot

	* [r6524] src/MBLClass.cxx: this seems to fix a (numb) memory leak
	  in Dimbl

2010-10-14 10:41  sloot

	* [r6518] src/IGExperiment.cxx: cleaner again

2010-10-14 09:34  sloot

	* [r6516] include/timbl/NewIBtree.h, src/NewIBtree.cxx: insightfull

2010-10-14 09:06  sloot

	* [r6515] include/timbl/NewIBtree.h, src/GetOptClass.cxx,
	  src/IGExperiment.cxx, src/Instance.cxx, src/NewIBtree.cxx,
	  src/TimblExperiment.cxx: make the compiler more happy

2010-10-14 08:43  sloot

	* [r6514] include/timbl/TimblExperiment.h, src/IGExperiment.cxx,
	  src/TimblExperiment.cxx: more cleanup and such

2010-10-13 15:49  sloot

	* [r6502] include/timbl/Instance.h,
	  include/timbl/TimblExperiment.h, src/IGExperiment.cxx,
	  src/Instance.cxx, src/MBLClass.cxx, src/TimblExperiment.cxx: more
	  cleanup

2010-10-13 15:01  sloot

	* [r6501] include/timbl/TimblExperiment.h, src/IGExperiment.cxx,
	  src/TimblExperiment.cxx: cleaning up

2010-10-12 16:37  sloot

	* [r6479] include/timbl/TimblExperiment.h, src/IGExperiment.cxx,
	  src/TimblExperiment.cxx: even faster training
	  testing is a problem still

2010-10-12 14:40  sloot

	* [r6472] include/timbl/TimblExperiment.h: cleanup

2010-10-12 14:39  sloot

	* [r6471] src/IGExperiment.cxx: again fixed the case where number
	  of Features==1 (rather weird)

2010-10-12 10:25  sloot

	* [r6469] src/IGExperiment.cxx: hit the same stone again

2010-10-12 08:47  sloot

	* [r6466] src/NewIBtree.cxx: fix yesterdays fix

2010-10-11 14:22  sloot

	* [r6460] include/timbl/NewIBtree.h, src/NewIBtree.cxx: some
	  polishing

2010-10-11 14:21  sloot

	* [r6459] src/TimblExperiment.cxx: display tree information after
	  reading a tree back in.

2010-10-11 12:22  sloot

	* [r6455] include/timbl/NewIBtree.h, src/NewIBtree.cxx: - fixed a
	  problem with exemplar weights.
	  - slight speedup

2010-10-06 14:20  sloot

	* [r6402] src/GetOptClass.cxx, src/IGExperiment.cxx,
	  src/TimblExperiment.cxx: fixed a server problem
	  server also seems to work with NewIBtree now

2010-10-06 10:56  sloot

	* [r6392] src/MBLClass.cxx: avoid trouble

2010-10-05 12:39  sloot

	* [r6363] include/timbl/NewIBtree.h, src/IBprocs.cxx,
	  src/NewIBtree.cxx: added branching info to NewIBtree.
	  on the fly fixed it for the old version

2010-10-05 08:05  sloot

	* [r6357] include/timbl/NewIBtree.h, src/NewIBtree.cxx: fixed leaf
	  detection

2010-10-04 15:47  sloot

	* [r6351] include/timbl/NewIBtree.h, src/IBprocs.cxx,
	  src/NewIBtree.cxx, src/TimblExperiment.cxx: store an retrieve of
	  NewIBTree works now.
	  testing in progress…

2010-09-23 15:14  sloot

	* [r6191] src/IGExperiment.cxx: spurious output

2010-09-23 15:08  sloot

	* [r6190] src/NewIBtree.cxx: fixed exemplaar weging

2010-09-23 14:33  sloot

	* [r6189] src/TimblExperiment.cxx: IB2 also done

2010-09-23 14:27  sloot

	* [r6188] src/IBprocs.cxx, src/TimblExperiment.cxx: CrossValidate
	  works also with NewIB now

2010-09-23 13:39  sloot

	* [r6184] include/timbl/NewIBtree.h, src/MBLClass.cxx,
	  src/NewIBtree.cxx, src/TRIBLExperiments.cxx: TRIBL2 works now
	  also (slow?)

2010-09-23 10:35  sloot

	* [r6182] src/NewIBtree.cxx: TRIBL works now, it seems

2010-09-23 10:00  sloot

	* [r6181] include/timbl/NewIBtree.h, src/NewIBtree.cxx: fixed
	  output

2010-09-21 16:22  sloot

	* [r6169] include/timbl/NewIBtree.h, src/NewIBtree.cxx: TRIBL
	  doesn't crash with --speedtrain=yes.
	  A small step...

2010-09-21 13:50  sloot

	* [r6165] include/timbl/Makefile.am, include/timbl/NewIBtree.h,
	  src/NewIBtree.cxx, src/TRIBLExperiments.cxx: so we are doomed
	  totaly now
	  DO NOT USE --speedtrain

2010-09-21 13:47  sloot

	* [r6164] src/IBprocs.cxx: and tihs, arghhh

2010-09-21 13:46  sloot

	* [r6163] include/timbl/MBLClass.h, src/MBLClass.cxx,
	  src/Makefile.am: and this

2010-09-21 13:45  sloot

	* [r6162] src/TimblExperiment.cxx: arghh.
	  this too. (WARNING ! --speedtrain is børken!)

2010-09-21 13:43  sloot

	* [r6161] include/timbl/TimblExperiment.h: needs rollback too

2010-09-21 13:40  sloot

	* [r6160] src/IGExperiment.cxx: roll back a few versions. does this
	  fix it?

2010-09-16 12:06  sloot

	* [r6127] include/timbl/NewIBtree.h, src/NewIBtree.cxx: gettin
	  nearer to the finish

2010-09-15 12:18  sloot

	* [r6119] include/timbl/NewIBtree.h, src/NewIBtree.cxx: added more
	  stuff to emulate the old IB trees

2010-09-14 15:52  sloot

	* [r6116] include/timbl/NewIBtree.h, src/NewIBtree.cxx: added first
	  attempts for test function.

2010-09-09 15:37  sloot

	* [r6067] src/NewIBtree.cxx: improved matching

2010-09-09 15:26  sloot

	* [r6066] include/timbl/NewIBtree.h, src/NewIBtree.cxx: excat
	  matching works now

2010-09-09 14:34  sloot

	* [r6065] include/timbl/NewIBtree.h, src/NewIBtree.cxx: started
	  work on New IB trees.
	  a lot to do....

2010-09-09 08:22  sloot

	* [r6052] src/Timbl.cxx: changed usage()

2010-09-01 15:04  sloot

	* [r5953] src/TimblExperiment.cxx: ____ ___ ___ ___ __
	  /\_ ,`\ / __`\ /' __` __`\ /'_ `\
	  \/_/ /_/\ \L\ \/\ \/\ \/\ \/\ \L\ \
	  /\____\ \____/\ \_\ \_\ \_\ \____ \
	  \/____/\/___/ \/_/\/_/\/_/\/___L\ \
	  /\____/
	  \_/__/

2010-09-01 13:44  sloot

	* [r5945] src/IBtree.cxx: clumsy attempt to do some less recursion

2010-08-31 11:18  sloot

	* [r5914] include/timbl/IndexClass.h, include/timbl/Makefile.am,
	  include/timbl/TimblExperiment.h, src/IGExperiment.cxx,
	  src/TimblExperiment.cxx: experimenting with faster
	  --speedtraining (memory hog!)

2010-08-23 13:16  sloot

	* [r5796] src/GetOptClass.cxx, src/TimblExperiment.cxx: hmm, Don't
	  do speedtraining as default

2010-08-23 13:14  sloot

	* [r5795] include/timbl/TimblExperiment.h, src/GetOptClass.cxx,
	  src/IBtree.cxx, src/IGExperiment.cxx, src/TimblExperiment.cxx:
	  some more code cleaning.

2010-08-17 16:14  sloot

	* [r5719] src/IBtree.cxx, src/TimblExperiment.cxx: more refactoring
	  going on

2010-08-17 14:19  sloot

	* [r5713] include/timbl/TimblExperiment.h, src/Testers.cxx,
	  src/TimblExperiment.cxx: more cleanup and such

2010-08-17 13:54  sloot

	* [r5707] src/TimblExperiment.cxx: hmpf

2010-08-17 13:54  sloot

	* [r5706] src/IGExperiment.cxx: cleanup

2010-08-17 13:53  sloot

	* [r5705] src/IBtree.cxx: Error not FatalError

2010-08-16 15:45  sloot

	* [r5690] include/timbl/TimblExperiment.h, src/IGExperiment.cxx,
	  src/TimblExperiment.cxx: cleanup training mess a bit.
	  maybe I will understand it myself some say.

2010-08-11 14:11  sloot

	* [r5675] include/timbl/IBtree.h, src/IBtree.cxx,
	  src/IGExperiment.cxx, src/TimblExperiment.cxx: made debugging
	  code for IBtree configurable at compiletime (#define IBSTATS)

2010-08-11 10:45  sloot

	* [r5673] include/timbl/IBtree.h, include/timbl/Types.h,
	  src/IBtree.cxx, src/IGExperiment.cxx, src/TimblExperiment.cxx:
	  added some debugging lines. Will spoil your u

2010-08-10 14:27  sloot

	* [r5670] include/timbl/Instance.h,
	  include/timbl/TimblExperiment.h, src/IGExperiment.cxx,
	  src/Instance.cxx, src/TimblExperiment.cxx: attamp to polisch
	  --speedtraining

2010-08-10 12:18  sloot

	* [r5669] include/timbl/GetOptClass.h,
	  include/timbl/TimblExperiment.h, src/GetOptClass.cxx,
	  src/IGExperiment.cxx, src/TimblExperiment.cxx: added an
	  --speedtrain option
	  This speeds up training (often a lot) but consumes more memory
	  (from 5 upto 30 %)
	  Work in progress

2010-08-09 15:06  sloot

	* [r5666] include/timbl/Instance.h,
	  include/timbl/TimblExperiment.h, src/IGExperiment.cxx,
	  src/Instance.cxx, src/TimblExperiment.cxx: added experimental
	  code for faster training. uses more memory. TESTING TESTING

2010-08-03 14:13  sloot

	* [r5626] include/timbl/TimblExperiment.h, src/IBtree.cxx,
	  src/IGExperiment.cxx, src/TimblExperiment.cxx: fixed problem with
	  one-feature input.
	  still trying to make training faster

2010-08-02 16:19  sloot

	* [r5623] include/timbl/IBtree.h, src/IBtree.cxx: slightly faster.
	  more thinking needed

2010-08-02 13:32  sloot

	* [r5620] include/timbl/TimblExperiment.h, src/IBtree.cxx,
	  src/IGExperiment.cxx, src/TimblExperiment.cxx: attempt to further
	  speed-up IB1 learning

2010-07-28 10:59  sloot

	* [r5560] include/timbl/IBtree.h, include/timbl/MBLClass.h,
	  include/timbl/TimblExperiment.h, src/GetOptClass.cxx,
	  src/IBprocs.cxx, src/IBtree.cxx, src/IGExperiment.cxx,
	  src/MBLClass.cxx, src/TimblExperiment.cxx: Implemented
	  alternative aproach for IB1 learning. (inspired by IGtree
	  learning)
	  Seems te be faster

2010-07-27 12:43  sloot

	* [r5541] include/timbl/TimblExperiment.h, src/IGExperiment.cxx,
	  src/TimblExperiment.cxx: code reshuffling in preparation of an
	  attempt to speed up IB1 learning.

2010-07-27 09:26  sloot

	* [r5534] src/IGExperiment.cxx, src/TimblExperiment.cxx: added some
	  more timing messages, to monitor preparation and learning

2010-07-27 09:24  sloot

	* [r5533] include/timbl/Common.h, src/Common.cxx: added toString()
	  method to Timer class

2010-07-19 15:36  sloot

	* [r5481] include/timbl/Testers.h, src/Testers.cxx: simplify

2010-07-19 15:00  sloot

	* [r5480] include/timbl/Metrics.h, src/Instance.cxx,
	  src/Metrics.cxx, src/Testers.cxx: attempt to better sort out
	  metrics and testers. hairy...

2010-07-19 09:58  sloot

	* [r5465] src/Testers.cxx: removed strange useless code

2010-07-14 14:53  sloot

	* [r5423] src/MBLClass.cxx: compile before checking in!

2010-07-14 14:51  sloot

	* [r5422] src/MBLClass.cxx: some more hackery for SD weighting

2010-07-14 10:31  sloot

	* [r5408] include/timbl/Instance.h, include/timbl/TimblAPI.h,
	  include/timbl/Types.h, src/Instance.cxx, src/MBLClass.cxx,
	  src/Timbl.cxx, src/TimblAPI.cxx, src/Types.cxx: Added SD
	  weighting (-wSD or -w5). Work in progress....

2010-07-13 15:11  sloot

	* [r5406] include/timbl/Metrics.h, include/timbl/Testers.h,
	  include/timbl/Types.h, src/GetOptClass.cxx, src/Metrics.cxx,
	  src/Testers.cxx, src/Types.cxx: arghhhh

2010-07-13 15:08  sloot

	* [r5404] include/timbl/Metrics.h, include/timbl/Testers.h,
	  include/timbl/Types.h, src/GetOptClass.cxx, src/Metrics.cxx,
	  src/Testers.cxx, src/Types.cxx: better english

2010-07-13 14:53  sloot

	* [r5402] include/timbl/Testers.h, src/MBLClass.cxx,
	  src/Testers.cxx: added -mE option: Euclidic distance for Numeric
	  Features

2010-07-13 14:03  sloot

	* [r5399] include/timbl/Metrics.h, include/timbl/Types.h,
	  src/GetOptClass.cxx, src/Metrics.cxx, src/Types.cxx: implemented
	  REAL Jeffreys Divergence
	  Renamed old version to Jensen-Shannon

2010-06-07 09:11  sloot

	* [r4920] configure.ac, docs/Timbl.man, m4/acx_pthread.m4,
	  m4/ax_openmp.m4: bumped version after release.
	  removed unneeded m4 macros
	  man is still in progress...

2010-06-02 13:50  sloot

	* [r4852] docs/TimblServer_1.0_Manual.pdf: removed here

2010-06-02 13:46  sloot

	* [r4850] docs/Makefile.am: TimblServer manual belongs to the
	  TimblServer Package!

2010-06-02 13:38  sloot

	* [r4849] docs/Makefile.am: added TimblServer Manual and updatet
	  version number

2010-05-31 13:34  sloot

	* [r4825] debian/changelog, docs/Timbl.man: first attempt for a
	  Timbl `man' page

2010-05-31 11:44  antalb

	* [r4823] docs/TimblServer_1.0_Manual.pdf, docs/Timbl_6.3_API.pdf,
	  docs/Timbl_6.3_Manual.pdf: added PDF versions of 6.3
	  documentation

2010-04-06 08:46  sloot

	* [r4276] src/Common.cxx, src/MBLClass.cxx,
	  src/TimblExperiment.cxx: fixed verbosity. I hope
	  removed unused function

2010-03-23 11:46  sloot

	* [r4127] m4: propset

2010-03-23 11:08  sloot

	* [r4124] include/timbl/GetOptClass.h: renamed fuction te be more
	  clear.

2010-03-23 10:48  sloot

	* [r4123] configure.ac: nor more mips

2010-03-22 10:02  sloot

	* [r4093] README: adapted readme

2010-03-10 13:24  sloot

	* [r3987] configure.ac: performed some cleaning

2010-03-10 11:02  sloot

	* [r3982] Makefile.am, configure.ac, init: init is unneeded and
	  unwanted

2010-03-10 09:37  sloot

	* [r3981] debian, debian/NEWS.Debian, debian/README.devel,
	  debian/TODO, debian/changelog, debian/compat, debian/control,
	  debian/copyright, debian/rules, debian/stamp-autotools-files:
	  give Timbl it's own debian build dir

2010-03-09 09:24  sloot

	* [r3958] AUTHORS: credits

2010-03-01 16:53  sloot

	* [r3832] timbl.pc.in: added dependency

2010-02-26 13:55  sloot

	* [r3808] src/TimblExperiment.cxx: added code to fix problem with
	  pre 4.0 g++ compilers

2010-02-24 12:37  sloot

	* [r3796] src/MBLClass.cxx: unneeded include

2010-02-24 12:31  sloot

	* [r3794] include/timbl/FdStream.h, include/timbl/MBLClass.h,
	  include/timbl/Makefile.am, src/FdStream.cxx, src/MBLClass.cxx,
	  src/Makefile.am: moved FdStream stuff to TimblServer

2010-02-24 12:16  sloot

	* [r3792] include/timbl/Common.h, include/timbl/GetOptClass.h,
	  include/timbl/TimblAPI.h, src/Common.cxx, src/FdStream.cxx: some
	  include file reshuffling

2010-02-23 13:40  sloot

	* [r3781] Makefile.am, configure.ac, demos/Makefile.am,
	  demos/sockettestClient.cxx, demos/sockettestServer.cxx,
	  include/timbl/LogBuffer.h, include/timbl/LogStream.h,
	  include/timbl/Makefile.am, include/timbl/ServerBase.h,
	  include/timbl/SocketBasics.h, include/timbl/TimblServerAPI.h,
	  src/LogBuffer.cxx, src/LogStream.cxx, src/Makefile.am,
	  src/ServerBase.cxx, src/SocketBasics.cxx, src/TimblClient.cxx,
	  src/TimblServer.cxx, src/TimblServerAPI.cxx: weeded all socket
	  stuff. is all moved to TimblServer

2010-02-15 13:59  sloot

	* [r3735] configure.ac: bumped version. trying to build a new
	  release soon

2010-02-15 13:17  sloot

	* [r3734] src/TimblServer.cxx: missing space

2010-02-15 13:15  sloot

	* [r3733] configure.ac, src/ServerBase.cxx: added an implementation
	  of 'daemon' for systems without it (Solaris, MacOSX)
	  added a test for 'daemon' in configure.ac

2010-02-15 11:32  sloot

	* [r3732] src/ServerBase.cxx: de keuze was een lekje of een crash
	  bij program termination.
	  Later nog eens uitzoeken.

2010-02-10 16:11  sloot

	* [r3708] src/TimblClient.cxx: changed confusing message

2010-02-10 16:10  sloot

	* [r3707] src/GetOptClass.cxx: removed confusing \n

2010-02-10 16:03  sloot

	* [r3706] src/MBLClass.cxx: warn when pre-read metrics are under
	  siege

2010-02-10 16:02  sloot

	* [r3705] src/ServerBase.cxx: i think this is wise

2010-02-10 16:01  sloot

	* [r3704] src/GetOptClass.cxx: forbid clients to change the preset
	  metrics

2010-02-10 15:03  sloot

	* [r3699] src/MBLClass.cxx: uninit value!

2010-02-10 11:58  sloot

	* [r3694] include/timbl/Instance.h, src/IBprocs.cxx,
	  src/Instance.cxx, src/TimblExperiment.cxx: Metric matrices that
	  have been read, are never deleted or replaced.
	  No feedback to the user yet

2010-02-10 11:52  sloot

	* [r3693] src/LOOExperiment.cxx: removed bogus lines (LOO en IB2
	  are incompatible)

2010-02-10 11:25  sloot

	* [r3691] src/ServerBase.cxx: oesp

2010-02-10 09:40  sloot

	* [r3684] src/ServerBase.cxx: plumbed the last important leak

2010-02-09 16:43  sloot

	* [r3674] src/ServerBase.cxx: an other leak

2010-02-09 16:21  sloot

	* [r3673] src/ServerBase.cxx, src/SocketBasics.cxx: plumbed a leak
	  better signal handling. (still not satisfying)

2010-02-09 13:49  sloot

	* [r3671] src/ServerBase.cxx: fix leak

2010-02-08 16:09  sloot

	* [r3666] src/ServerBase.cxx: add some verbosity

2010-02-08 16:08  sloot

	* [r3665] src/TimblExperiment.cxx: added comment

2010-02-08 13:52  sloot

	* [r3658] src/Timbl.cxx: improved usage()

2010-02-08 10:06  sloot

	* [r3654] src/TimblServer.cxx: softExit also for Server

2010-02-08 10:00  sloot

	* [r3653] src/Timbl.cxx: bail out more sophisticated

2010-02-01 15:15  sloot

	* [r3625] src/GetOptClass.cxx: meer kritisch op tegenstrijdige
	  opties

2010-01-27 15:49  sloot

	* [r3596] include/timbl/GetOptClass.h, include/timbl/ServerBase.h,
	  src/GetOptClass.cxx, src/ServerBase.cxx, src/TimblServer.cxx:
	  added --daemonize option for the server
	  handle som signals
	  Changed some Info messages from GetOpt into Errors

2010-01-26 10:56  sloot

	* [r3586] src/MBLClass.cxx: attempt to fix server bug

2010-01-25 16:42  sloot

	* [r3577] include/timbl/Matrices.h, src/Instance.cxx: copy user
	  proviede matrices to server children

2010-01-25 16:41  sloot

	* [r3576] src/ServerBase.cxx: debug was used uninitialized

2010-01-25 16:40  sloot

	* [r3575] src/MBLClass.cxx: - raised maximum allowed number of
	  neigbors
	  - clip factor wasn't copied to server childs

2010-01-18 16:15  sloot

	* [r3524] bootstrap: cleanup. We need automake 1.10 which is called
	  automake

2010-01-18 16:14  sloot

	* [r3523] Makefile.am: ok, Lenny DOES support it, but you must
	  install automake y

2010-01-18 15:40  sloot

	* [r3522] Makefile.am: aclocal --install doesnt work on lenny ;{

2010-01-18 15:40  sloot

	* [r3521] m4/acx_pthread.m4, m4/pkg.m4: add two macro's to the
	  package. aclocal --install doesn't work in lenny :{

2010-01-18 14:35  sloot

	* [r3520] configure.ac: for now, we build all for pthreads

2010-01-18 13:18  sloot

	* [r3517] demos/api_test1.cxx, demos/api_test2.cxx,
	  demos/api_test3.cxx, demos/api_test4.cxx, demos/api_test5.cxx,
	  demos/api_test6.cxx, demos/classify.cxx,
	  demos/sockettestClient.cxx, demos/sockettestServer.cxx,
	  demos/tse.cxx, include/timbl/BestArray.h,
	  include/timbl/Choppers.h, include/timbl/CommandLine.h,
	  include/timbl/Common.h, include/timbl/FdStream.h,
	  include/timbl/GetOptClass.h, include/timbl/IBtree.h,
	  include/timbl/Instance.h, include/timbl/LogBuffer.h,
	  include/timbl/LogStream.h, include/timbl/MBLClass.h,
	  include/timbl/Matrices.h, include/timbl/Metrics.h,
	  include/timbl/MsgClass.h, include/timbl/Options.h,
	  include/timbl/ServerBase.h, include/timbl/SocketBasics.h,
	  include/timbl/Statistics.h, include/timbl/StringOps.h,
	  include/timbl/Testers.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, include/timbl/TimblServerAPI.h,
	  include/timbl/Tree.h, include/timbl/Trie.h,
	  include/timbl/Types.h, include/timbl/neighborSet.h,
	  src/BestArray.cxx, src/CVExperiment.cxx, src/Choppers.cxx,
	  src/CommandLine.cxx, src/Common.cxx, src/FdStream.cxx,
	  src/GetOptClass.cxx, src/IBprocs.cxx, src/IBtree.cxx,
	  src/IGExperiment.cxx, src/Instance.cxx, src/LOOExperiment.cxx,
	  src/LogBuffer.cxx, src/LogStream.cxx, src/MBLClass.cxx,
	  src/Metrics.cxx, src/MsgClass.cxx, src/ServerBase.cxx,
	  src/SocketBasics.cxx, src/Statistics.cxx, src/StringOps.cxx,
	  src/TRIBLExperiments.cxx, src/Testers.cxx, src/Timbl.cxx,
	  src/TimblAPI.cxx, src/TimblClient.cxx, src/TimblExperiment.cxx,
	  src/TimblServer.cxx, src/TimblServerAPI.cxx, src/Tree.cxx,
	  src/Types.cxx, src/neighborSet.cxx: more socket exorcism
	  Bumped year. It's 2010 now

2010-01-13 17:02  sloot

	* [r3510] include/timbl/MBLClass.h, include/timbl/ServerBase.h,
	  src/IGExperiment.cxx, src/ServerBase.cxx,
	  src/TimblExperiment.cxx: and more steps...

2010-01-13 15:40  sloot

	* [r3508] include/timbl/GetOptClass.h, include/timbl/MBLClass.h,
	  include/timbl/ServerBase.h, include/timbl/TimblExperiment.h,
	  src/GetOptClass.cxx, src/ServerBase.cxx, src/TimblAPI.cxx,
	  src/TimblExperiment.cxx, src/TimblServerAPI.cxx: and more server
	  cleanup

2010-01-12 16:40  sloot

	* [r3505] include/timbl/MBLClass.h, include/timbl/Makefile.am,
	  include/timbl/ServerBase.h, include/timbl/TimblExperiment.h,
	  src/Instance.cxx, src/MBLClass.cxx, src/ServerBase.cxx,
	  src/TimblExperiment.cxx: more server activity

2010-01-12 11:56  sloot

	* [r3499] include/timbl/ServerBase.h, include/timbl/ServerProcs.h,
	  src/Makefile.am, src/ServerBase.cxx, src/ServerProcs.cxx,
	  src/TimblClient.cxx: more server cleanup

2010-01-12 10:07  sloot

	* [r3498] ., demos, m4, src: properties

2010-01-11 11:08  sloot

	* [r3492] timblserver.pc.in: added missing file

2010-01-11 10:44  sloot

	* [r3490] include/timbl/MBLClass.h, include/timbl/ServerBase.h,
	  include/timbl/TimblExperiment.h, src/CVExperiment.cxx,
	  src/GetOptClass.cxx, src/IBprocs.cxx, src/IGExperiment.cxx,
	  src/LOOExperiment.cxx, src/MBLClass.cxx, src/ServerProcs.cxx,
	  src/TRIBLExperiments.cxx, src/TimblAPI.cxx,
	  src/TimblExperiment.cxx: next step in separating server stuff

2010-01-11 09:20  sloot

	* [r3488] src/ServerProcs.cxx: tekst gelijk aan oudere versies, om
	  verwarring te voorkomen.

2010-01-05 16:26  sloot

	* [r3468] Makefile.am, configure.ac, include/timbl/GetOptClass.h,
	  include/timbl/TimblExperiment.h, src/GetOptClass.cxx,
	  src/Makefile.am, src/ServerProcs.cxx, src/Timbl.cxx,
	  src/TimblAPI.cxx, src/TimblExperiment.cxx,
	  src/TimblServerAPI.cxx: started weeding Server stuff from all
	  places.
	  This will break all current Mbt, Dimbl and Tadpole builds!

2010-01-05 14:49  sloot

	* [r3466] src/Makefile.am: typo

2010-01-05 14:35  sloot

	* [r3464] include/timbl/GetOptClass.h, include/timbl/ServerBase.h,
	  include/timbl/TimblServerAPI.h, src/ServerBase.cxx,
	  src/ServerProcs.cxx, src/TimblServer.cxx, src/TimblServerAPI.cxx:
	  ok, nu werkt TimblServer echt

2010-01-04 16:38  sloot

	* [r3453] include/timbl/ServerBase.h, src/Makefile.am,
	  src/ServerBase.cxx, src/ServerProcs.cxx, src/TimblServer.cxx:
	  TimblServer now works. Please don't try this at home!

2010-01-04 14:51  sloot

	* [r3451] include/timbl/MBLClass.h, include/timbl/Makefile.am,
	  include/timbl/ServerBase.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, include/timbl/TimblServerAPI.h,
	  src/Makefile.am, src/ServerBase.cxx, src/TimblServer.cxx,
	  src/TimblServerAPI.cxx: first attempt to separate the servermode
	  of Timbl in a separate TimblServer program.

2009-12-23 10:41  sloot

	* [r3432] include/timbl/TimblExperiment.h: identation

2009-12-22 10:38  sloot

	* [r3407] AUTHORS: Another contributor

2009-12-22 10:31  sloot

	* [r3406] configure.ac: fixed syntax errors (which bugged FreeBSD)

2009-12-22 10:30  sloot

	* [r3405] demos/sockettestServer.cxx: fixed pointer problem om 64
	  bits systems

2009-12-15 14:21  sloot

	* [r3363] configure.ac, include/timbl/TimblAPI.h, src/TimblAPI.cxx:
	  Aded two functions to the API.
	  Bumped version

2009-12-14 11:58  sloot

	* [r3347] src/Instance.cxx: oesp

2009-12-14 11:39  sloot

	* [r3345] AUTHORS: contributor erbij

2009-12-14 11:38  sloot

	* [r3344] src/Instance.cxx: Avoid negative info_gains

2009-12-09 16:46  sloot

	* [r3328] ChangeLog: changed

2009-12-07 08:12  sloot

	* [r3326] NEWS, configure.ac: argh. forgotten to commit

2009-11-30 13:04  sloot

	* [r3305] configure.ac, include/timbl/TimblAPI.h, src/TimblAPI.cxx:
	  added a function to the API, bumped version therefore

2009-11-17 21:24  joostvb

	* [r3244] NEWS, configure.ac: change to strict increasing version
	  numbering scheme

2009-11-17 15:24  sloot

	* [r3243] configure.ac: bump version for RC1

2009-11-17 14:30  sloot

	* [r3241] src/ServerProcs.cxx: better logging in the server

2009-11-17 10:39  sloot

	* [r3232] include/timbl/ServerProcs.h, src/ServerProcs.cxx,
	  src/Timbl.cxx, src/TimblClient.cxx: Added base parameter to the
	  Client

2009-11-16 16:19  sloot

	* [r3227] include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/ServerProcs.cxx,
	  src/Timbl.cxx, src/TimblAPI.cxx, src/TimblExperiment.cxx:
	  Multiple TCP servers on one socket work now

2009-11-16 09:56  sloot

	* [r3222] src/SocketBasics.cxx: Make it work for Cygwin (and other
	  braindead systems without GETADDRRINFO)

2009-11-10 17:12  sloot

	* [r3184] include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/ServerProcs.cxx,
	  src/Timbl.cxx, src/TimblAPI.cxx, src/TimblExperiment.cxx: next
	  step to multiple base server

2009-11-10 15:42  sloot

	* [r3183] src/ServerProcs.cxx: on our way to multiple Timbl on 1
	  socket

2009-11-10 14:51  sloot

	* [r3182] include/timbl/MBLClass.h, src/MBLClass.cxx,
	  src/ServerProcs.cxx, src/TimblExperiment.cxx: clearer again

2009-11-10 11:50  sloot

	* [r3174] include/timbl/GetOptClass.h, include/timbl/MBLClass.h,
	  src/GetOptClass.cxx, src/MBLClass.cxx, src/TimblExperiment.cxx:
	  blijven poetsen

2009-11-10 11:18  sloot

	* [r3173] include/timbl/MBLClass.h,
	  include/timbl/TimblExperiment.h, src/MBLClass.cxx,
	  src/ServerProcs.cxx, src/TimblExperiment.cxx: start cleaning up
	  socket mess

2009-11-09 11:30  sloot

	* [r3152] m4/Makefile.am: package pkg.m4 too

2009-11-04 22:04  antalb

	* [r3145] README: updated the README to 6.2

2009-11-03 10:56  sloot

	* [r3127] docs/Timbl_6.2_Manual.pdf: last minute edit

2009-11-03 08:29  sloot

	* [r3121] configure.ac: typo

2009-11-02 08:38  sloot

	* [r3118] ChangeLog, configure.ac, docs/Timbl_6.2_API.pdf,
	  docs/Timbl_6.2_Manual.pdf, src/Timbl.cxx: Modified intro text
	  manuals are up-to-date now
	  version bumped to 6.2 (again)

2009-10-27 16:00  sloot

	* [r3111] src/Instance.cxx: another pointer problem fixed that made
	  Dimpl go wild

2009-10-26 16:34  sloot

	* [r3106] demos/sockettestServer.cxx, src/FdStream.cxx: added
	  dependencies to make GCC 4.4 happy

2009-10-26 10:04  sloot

	* [r3105] src/Instance.cxx: fix Dimpl crashed. side-effects
	  unclear!

2009-10-21 14:08  joostvb

	* [r3101] NEWS, configure.ac: prepare for next (snapshot) release

2009-10-21 13:54  joostvb

	* [r3099] ChangeLog, docs/Makefile.am, docs/Timbl_6.2_API.pdf: add
	  missing document. now can build from svn. (ran
	  joostvb@bruhat:~/svn/svn.ilk.uvt.nl/TimblManual% pdflatex
	  Timbl_6.2_API.tex)

2009-10-21 13:44  joostvb

	* [r3098] NEWS: record changes

2009-10-21 13:37  joostvb

	* [r3097] ChangeLog, NEWS, configure.ac: list releases as published
	  on http://ilk.uvt.nl/packages/beta/

2009-10-20 14:56  sloot

	* [r3086] src/MBLClass.cxx: should stop Dimpl from crashing

2009-10-20 14:53  antalb

	* [r3083] docs/Timbl_6.2_Manual.pdf: New version of manual

2009-10-20 09:05  sloot

	* [r3074] configure.ac: added extra PKG_CONFIG check (redundant?)

2009-10-20 08:03  sloot

	* [r3073] docs/Timbl_6.2_Manual.pdf: added documentation. (beta
	  state)

2009-10-19 15:36  sloot

	* [r3070] src/Instance.cxx: should make Mac happy

2009-10-19 15:24  sloot

	* [r3068] src/TimblExperiment.cxx: fix output

2009-10-19 14:52  sloot

	* [r3067] src/TimblAPI.cxx: hmmm. hope this helps.

2009-10-19 14:32  sloot

	* [r3066] src/GetOptClass.cxx: moved setting of weights to teh 'run
	  once' part

2009-10-19 14:22  sloot

	* [r3065] demos/api_test1.cxx: changed example

2009-10-19 13:49  sloot

	* [r3063] src/TimblExperiment.cxx: avoid deleting the outputfile
	  when we don't realy start a new test

2009-10-19 13:48  sloot

	* [r3062] src/Timbl.cxx: changed 'usage()'

2009-10-19 13:47  sloot

	* [r3061] docs/Makefile.am: get ready to pack 6.2 docs

2009-10-19 13:47  sloot

	* [r3060] configure.ac: naming was a bit optimistic. back to RC1
	  now

2009-10-14 15:10  sloot

	* [r3051] src/ServerProcs.cxx: small improvement

2009-10-14 10:49  sloot

	* [r3049] src/MBLClass.cxx, src/ServerProcs.cxx,
	  src/TimblExperiment.cxx: finally fixed memory problem with
	  sockets?

2009-10-13 14:26  sloot

	* [r3041] src/MBLClass.cxx, src/TRIBLExperiments.cxx: fixed two
	  memory leaks

2009-10-05 16:08  sloot

	* [r3025] configure.ac, src/MBLClass.cxx, src/ServerProcs.cxx: ai
	  vergeten in te checken

2009-10-05 14:50  sloot

	* [r3020] src/MBLClass.cxx: attempt to fix memory leaks

2009-10-05 13:31  sloot

	* [r3018] include/timbl/FdStream.h, include/timbl/XMLtools.h,
	  src/Instance.cxx, src/MBLClass.cxx, src/Metrics.cxx,
	  src/ServerProcs.cxx, src/Testers.cxx, src/XMLtools.cxx: fixed DC
	  and L, i hope
	  XML output via HTTP worsk now for lots of bytes also

2009-09-30 16:30  sloot

	* [r2994] include/timbl/Instance.h, src/Instance.cxx,
	  src/MBLClass.cxx: temporraraly fixed a crash. But now the server
	  leaks ;[

2009-09-30 16:01  sloot

	* [r2993] include/timbl/Instance.h, include/timbl/MBLClass.h,
	  include/timbl/TimblExperiment.h, src/Instance.cxx,
	  src/MBLClass.cxx, src/ServerProcs.cxx, src/Testers.cxx,
	  src/TimblExperiment.cxx: fixed a problem with serverclients
	  ignoring metric Settings.
	  stiil a bit uncertain about some aspects. shiver

2009-09-29 14:02  sloot

	* [r2986] include/timbl/MBLClass.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/MBLClass.cxx,
	  src/ServerProcs.cxx, src/TimblAPI.cxx, src/TimblExperiment.cxx:
	  added sowm set and show options to the HTTP server
	  multiple classifications in one GET are possible

2009-09-28 15:37  sloot

	* [r2981] include/timbl/XMLtools.h, src/XMLtools.cxx: new files

2009-09-28 15:29  sloot

	* [r2980] configure.ac, include/timbl/BestArray.h,
	  include/timbl/IBtree.h, include/timbl/MBLClass.h,
	  include/timbl/Makefile.am, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/BestArray.cxx,
	  src/IBtree.cxx, src/Makefile.am, src/ServerProcs.cxx,
	  src/Timbl.cxx, src/TimblAPI.cxx, src/TimblExperiment.cxx: XML
	  output is now created using libxml2.
	  A small wrapper is added to accomplish this

2009-09-22 16:00  sloot

	* [r2967] src/ServerProcs.cxx: stopped server from crashing

2009-09-22 15:31  sloot

	* [r2966] include/timbl/Common.h, include/timbl/FdStream.h,
	  include/timbl/Makefile.am, include/timbl/TimblExperiment.h,
	  src/Common.cxx, src/FdStream.cxx, src/MBLClass.cxx,
	  src/Makefile.am, src/ServerProcs.cxx, src/SocketBasics.cxx: added
	  stream interface for sockets

2009-09-22 10:25  sloot

	* [r2963] src/ServerProcs.cxx: more sensible results from
	  httpServer now

2009-09-22 09:30  sloot

	* [r2962] src/Timbl.cxx: added -mDC to usage

2009-09-21 15:14  sloot

	* [r2959] src/Testers.cxx: some more debug lines added

2009-09-21 15:12  sloot

	* [r2958] src/ServerProcs.cxx: oesp

2009-09-21 12:15  sloot

	* [r2956] include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/ServerProcs.cxx,
	  src/Timbl.cxx, src/TimblAPI.cxx, src/TimblExperiment.cxx: cleanup
	  and some renaming

2009-09-21 08:25  sloot

	* [r2955] src/ServerProcs.cxx: fixed errors on OSX (i hope)

2009-09-16 15:55  sloot

	* [r2953] include/timbl/BestArray.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/BestArray.cxx,
	  src/ServerProcs.cxx, src/TimblAPI.cxx, src/TimblExperiment.cxx:
	  added 'houtje touwtje' XML output

2009-09-16 14:47  sloot

	* [r2951] include/timbl/TimblExperiment.h, src/ServerProcs.cxx,
	  src/SocketBasics.cxx, src/Timbl.cxx, src/TimblExperiment.cxx:
	  added VERY EXPERIMENTAL code for a HTTP service that can handle
	  multiple experiments on one socket

2009-09-16 14:43  sloot

	* [r2950] include/timbl/GetOptClass.h, src/GetOptClass.cxx: new
	  'serverconfig' option added

2009-09-16 14:42  sloot

	* [r2949] include/timbl/TimblAPI.h, src/TimblAPI.cxx: new features
	  for the API

2009-09-14 16:31  sloot

	* [r2941] src/ServerProcs.cxx: better yet

2009-09-14 16:26  sloot

	* [r2940] src/ServerProcs.cxx, src/SocketBasics.cxx: hackin hacking

2009-09-14 15:47  sloot

	* [r2939] src/ServerProcs.cxx: use our Timer class now
	  added rudimentary HTTP support to the sever

2009-09-14 15:46  sloot

	* [r2938] include/timbl/Common.h, src/Common.cxx: added methods to
	  Timer class

2009-09-10 12:17  sloot

	* [r2934] src/MBLClass.cxx: argh. Uninitialized var

2009-09-10 12:17  sloot

	* [r2933] src/SocketBasics.cxx: typo

2009-09-08 15:26  sloot

	* [r2927] Makefile.am, configure.ac, demos/Makefile.am, m4,
	  m4/Makefile.am, m4/ax_openmp.m4: made sockettest compilation
	  dependend on OpenMP

2009-09-08 13:39  sloot

	* [r2921] demos/sockettestServer.cxx, src/SocketBasics.cxx: better
	  message

2009-09-08 12:08  sloot

	* [r2918] demos/sockettestClient.cxx, demos/sockettestServer.cxx,
	  include/timbl/SocketBasics.h, src/SocketBasics.cxx: added
	  non-blocking writes and adapted tests

2009-09-08 11:29  sloot

	* [r2915] demos/sockettestClient.cxx, demos/sockettestServer.cxx:
	  better tests, also for nonBlockin sockets

2009-09-08 11:29  sloot

	* [r2914] include/timbl/SocketBasics.h, src/SocketBasics.cxx: fix
	  nonBlocking mode and read

2009-09-08 09:19  sloot

	* [r2912] demos/Makefile.am, demos/sockettestClient.cxx,
	  demos/sockettestServer.cxx: added test programs for socket
	  interface.
	  TODO: works only with openMP so make building conditional

2009-09-08 09:17  sloot

	* [r2911] src/SocketBasics.cxx: bug fix

2009-09-08 09:17  sloot

	* [r2910] include/timbl/SocketBasics.h: refactored; solves a bug,
	  but don't know why

2009-09-07 09:54  sloot

	* [r2905] Makefile.am: 'make distcheck' works for me

2009-09-05 06:36  joostvb

	* [r2895] ChangeLog, NEWS, configure.ac: prepare next svn snapshot,
	  fix typo in version numbers in NEWS

2009-09-05 06:32  joostvb

	* [r2894] Makefile.am: do not install ChangeLog: it interferes bad
	  with Debian packaging

2009-09-05 06:32  joostvb

	* [r2893] Makefile.am: tags

2009-09-03 13:37  sloot

	* [r2883] ChangeLog, configure.ac: ship it!

2009-09-03 13:36  sloot

	* [r2882] NEWS, include/timbl/SocketBasics.h, src/SocketBasics.cxx:
	  added non-blocking sockets; not tested yet (!)

2009-09-02 16:26  sloot

	* [r2879] src/ServerProcs.cxx: close std files only when a logfile
	  is specified.
	  So the daemon stays connected to the terminal!

2009-09-02 14:05  sloot

	* [r2872] configure.ac: cleanup

2009-08-31 12:07  sloot

	* [r2849] ., ChangeLog, NEWS: NEWS en properties

2009-08-31 10:27  sloot

	* [r2847] bootstrap: m4 dir is created when needed

2009-08-31 10:15  sloot

	* [r2846] m4: delete this please

2009-08-25 14:44  sloot

	* [r2834] AUTHORS: another contributor

2009-08-18 12:26  

	* [r2816] src/Common.cxx: leave endl to the caller!

2009-08-18 09:10  

	* [r2813] src/IGExperiment.cxx, src/TRIBLExperiments.cxx: honour
	  SILENT again. Refactoring isn't easy

2009-08-18 08:47  

	* [r2812] src/TimblExperiment.cxx: not all good ideas are brilliant

2009-08-17 11:01  

	* [r2809] src/GetOptClass.cxx: oesp

2009-08-11 09:06  

	* [r2806] src/LOOExperiment.cxx: it's not only hard, but also
	  confusing.

2009-08-11 08:56  

	* [r2804] src/LOOExperiment.cxx, src/TimblExperiment.cxx: small
	  refactoring. it's hard ;{

2009-08-10 14:42  

	* [r2803] include/timbl/TimblExperiment.h, src/IGExperiment.cxx:
	  hmm. we don't want to see metric ino for IG tree

2009-08-10 14:32  

	* [r2802] include/timbl/TimblExperiment.h, src/CVExperiment.cxx,
	  src/IGExperiment.cxx, src/LOOExperiment.cxx,
	  src/TRIBLExperiments.cxx, src/TimblExperiment.cxx: refactoring:
	  working towards more stream-like tests

2009-08-10 09:29  

	* [r2801] src/IBprocs.cxx, src/IGExperiment.cxx,
	  src/TRIBLExperiments.cxx, src/TimblExperiment.cxx: fixed typo at
	  5 places

2009-08-05 14:23  

	* [r2799] include/timbl/TimblExperiment.h, src/CVExperiment.cxx,
	  src/LOOExperiment.cxx, src/TimblAPI.cxx, src/TimblExperiment.cxx:
	  started refactoring to make a stream interface more easy to do

2009-08-05 13:38  

	* [r2798] include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/TimblAPI.cxx,
	  src/TimblExperiment.cxx: renamed matchedAtTerminal() to
	  matchedAtLeaf()

2009-08-05 10:36  

	* [r2796] src/LOOExperiment.cxx, src/MBLClass.cxx,
	  src/TimblExperiment.cxx: removed nonfunctional "-" filenames

2009-08-05 09:34  

	* [r2793] src/TimblAPI.cxx: layout

2009-08-05 09:23  

	* [r2792] include/timbl/IBtree.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/IBtree.cxx,
	  src/IGExperiment.cxx, src/TRIBLExperiments.cxx, src/TimblAPI.cxx,
	  src/TimblExperiment.cxx: +vmd works now for all algorithms
	  Added two methods to the API to get the result available:
	  match_depth() to return the depth, and matchedAtTerminal() to see
	  if it matched at a terminal node

2009-08-04 16:07  

	* [r2789] src/CommandLine.cxx: more clear now

2009-08-04 14:47  

	* [r2787] init/timbl.in: --logfile and --pidfile also here

2009-08-04 14:09  

	* [r2784] src/CommandLine.cxx, src/GetOptClass.cxx: 'long'
	  commandline options need 2 hyphens now.
	  so --silly=yes, --sloppy=true and so on.
	  also values are better checked now.

2009-07-22 15:16  

	* [r2761] src/TimblExperiment.cxx: one line to much

2009-07-22 15:13  

	* [r2760] src/TimblExperiment.cxx: another small step for a man

2009-07-22 14:13  

	* [r2759] include/timbl/MBLClass.h,
	  include/timbl/TimblExperiment.h, src/CVExperiment.cxx,
	  src/MBLClass.cxx, src/TimblExperiment.cxx: refactor some stuff

2009-07-20 13:30  

	* [r2753] src/IGExperiment.cxx: outcommented timers

2009-07-20 10:41  

	* [r2749] src/StringOps.cxx: fixed error for empty strings

2009-07-14 13:54  

	* [r2744] include/timbl/Common.h, src/Common.cxx,
	  src/IGExperiment.cxx: Timer seems a usefull thingy. So add it to
	  Commons.

2009-07-14 13:31  

	* [r2743] src/IBtree.cxx: Bail out if we don't get what we want.

2009-07-14 12:34  

	* [r2742] include/timbl/TimblExperiment.h, src/IBtree.cxx,
	  src/IGExperiment.cxx: simple attempt to speed up

2009-07-09 16:38  

	* [r2738] src/Instance.cxx: i hope this fixes the problems with not
	  using Value Matrices

2009-07-09 14:07  

	* [r2729] src/Instance.cxx: o noes. It is really broken :{

2009-07-09 13:43  

	* [r2728] src/Instance.cxx: o no.
	  stored matrices were ignored!

2009-07-08 15:49  

	* [r2727] src/IGExperiment.cxx: added extra timing code in IG tree
	  building. if you don't want to see it, don't update ;)

2009-07-08 15:48  

	* [r2726] src/MBLClass.cxx: oesp

2009-07-07 10:48  

	* [r2723] include/timbl/Matrices.h, src/Instance.cxx,
	  src/Timbl.cxx: nog wat gehak. Featurewaarden kunnen ook ','
	  bevatten namelijk

2009-07-07 09:31  

	* [r2722] src/Timbl.cxx: - write matrices even without a testfile
	  - typo

2009-07-06 14:27  

	* [r2721] src/Timbl.cxx: enabled storing and retrieving
	  ValueMatrices using -matrixout=<name> and -matrixin=name

2009-07-06 14:11  

	* [r2720] include/timbl/Instance.h, src/Instance.cxx,
	  src/MBLClass.cxx, src/TimblExperiment.cxx: writing and reading
	  ValueMatrices seems to work now.

2009-07-06 08:51  

	* [r2719] src/MBLClass.cxx: two typos

2009-07-02 07:47  

	* [r2705] src/IGExperiment.cxx: yet another numb change to test
	  'ci' mailing

2009-07-02 07:24  

	* [r2704] src/CVExperiment.cxx: new attempt to see if 'ci' forces
	  mail

2009-07-01 11:25  

	* [r2703] src/IGExperiment.cxx: changhe to test mailing list

2009-06-30 16:05  

	* [r2702] include/timbl/Instance.h, include/timbl/MBLClass.h,
	  include/timbl/Matrices.h, include/timbl/TimblExperiment.h,
	  src/Instance.cxx, src/MBLClass.cxx, src/TimblAPI.cxx,
	  src/TimblExperiment.cxx: started implementing write/read of VD
	  matrices. Not quite done yet

2009-06-30 08:38  

	* [r2700] include/timbl/.cvsignore, include/timbl/GetOptClass.h,
	  include/timbl/MBLClass.h, include/timbl/SocketBasics.h,
	  src/CVExperiment.cxx, src/GetOptClass.cxx, src/IBprocs.cxx,
	  src/IGExperiment.cxx, src/LOOExperiment.cxx, src/ServerProcs.cxx,
	  src/SocketBasics.cxx, src/TRIBLExperiments.cxx, src/TimblAPI.cxx,
	  src/TimblClient.cxx, src/TimblExperiment.cxx: Sockets in own
	  namespace

2009-06-30 08:02  

	* [r2699] include/timbl/config.h: doesn't belong in SVN

2009-06-29 15:34  

	* [r2698] src/ServerProcs.cxx: oesp

2009-06-29 15:25  

	* [r2697] src/CVExperiment.cxx, src/IBprocs.cxx,
	  src/LOOExperiment.cxx: fixed ./configure --enable-server=no

2009-06-29 15:06  

	* [r2696] include/timbl/SocketBasics.h, src/ServerProcs.cxx,
	  src/SocketBasics.cxx: i think it works now for both with and
	  withoy GETADDRINFO

2009-06-24 16:51  

	* [r2695] include/timbl/GetOptClass.h, include/timbl/MBLClass.h,
	  include/timbl/SocketBasics.h, include/timbl/TimblExperiment.h,
	  src/GetOptClass.cxx, src/MBLClass.cxx, src/ServerProcs.cxx,
	  src/SocketBasics.cxx, src/Testers.cxx, src/TimblExperiment.cxx:
	  on our way to a more OO socket handling. Not done for old (non
	  getaddrinfo kind) unix variants

2009-06-24 10:30  

	* [r2694] src/Metrics.cxx: fixed dice (bug 29)

2009-06-23 13:43  

	* [r2691] src/Metrics.cxx: other dice calculation. still fails on
	  unigrams

2009-06-22 16:04  

	* [r2687] configure.ac: revert to sane version number

2009-06-22 15:56  

	* [r2686] configure.ac, include/timbl/Makefile.am: ship needed
	  header file with tarball

2009-06-16 16:16  

	* [r2666] include/timbl/TimblAPI.h, src/Timbl.cxx,
	  src/TimblAPI.cxx: start to add new function to API for
	  storing/retrieving ValueDifference Matrices

2009-06-15 13:33  

	* [r2664] src/Metrics.cxx: numb refactoring

2009-06-15 13:24  

	* [r2663] src/MBLClass.cxx: fixed memory leak

2009-06-10 15:05  

	* [r2652] src/Metrics.cxx: shorter

2009-06-10 14:47  

	* [r2651] src/Metrics.cxx: fix dixe metric for short words

2009-06-10 14:47  

	* [r2650] src/GetOptClass.cxx: forgotten case

2009-06-10 13:30  

	* [r2648] src/MBLClass.cxx: attempt to streamline metric setting

2009-06-10 13:27  

	* [r2647] src/GetOptClass.cxx: better text

2009-06-10 12:56  

	* [r2646] src/Instance.cxx: signal problem more expressive

2009-06-09 08:35  

	* [r2640] configure.ac: getting ready for release

2009-06-08 15:52  

	* [r2639] include/timbl/Testers.h, src/Testers.cxx: small step

2009-06-08 15:41  

	* [r2638] include/timbl/Instance.h, include/timbl/Testers.h,
	  src/Instance.cxx, src/MBLClass.cxx, src/Testers.cxx: phew. leaner
	  and meaner

2009-06-08 14:16  

	* [r2637] include/timbl/Metrics.h: hmm, some more slack

2009-06-08 14:05  

	* [r2636] include/timbl/Instance.h, include/timbl/Metrics.h,
	  include/timbl/Testers.h, src/IBprocs.cxx, src/Instance.cxx,
	  src/MBLClass.cxx, src/Metrics.cxx, src/Testers.cxx,
	  src/TimblExperiment.cxx: more metric and testing reshuffling

2009-06-02 15:49  

	* [r2632] include/timbl/Testers.h, src/Metrics.cxx,
	  src/Testers.cxx: next small step

2009-06-02 14:48  

	* [r2631] include/timbl/Instance.h, include/timbl/Metrics.h,
	  include/timbl/Testers.h, src/Instance.cxx, src/Testers.cxx: some
	  renaming

2009-06-02 14:03  

	* [r2629] include/timbl/BestArray.h, include/timbl/Instance.h,
	  include/timbl/TimblExperiment.h, src/GetOptClass.cxx,
	  src/IBprocs.cxx, src/IGExperiment.cxx, src/MBLClass.cxx,
	  src/Testers.cxx: some cleanup

2009-06-02 10:58  

	* [r2628] include/timbl/Metrics.h, include/timbl/Testers.h,
	  src/GetOptClass.cxx, src/IBprocs.cxx, src/Instance.cxx,
	  src/MBLClass.cxx, src/Makefile.am, src/Metrics.cxx,
	  src/Testers.cxx, src/TimblExperiment.cxx: split up Metrics and
	  Testers

2009-06-02 08:24  

	* [r2627] src/TimblExperiment.cxx: removed IB2_HACK stuff. The new
	  implementation is accepted (by me)

2009-05-27 13:50  

	* [r2623] include/timbl/Options.h, src/MBLClass.cxx: fixed some
	  cornercases

2009-05-27 13:49  

	* [r2622] src/GetOptClass.cxx: ai. -silly and -sloppy were nog
	  handled correctly. Changed interface.

2009-05-27 13:48  

	* [r2621] demos/api_test1.cxx: modified test, to get some results.

2009-05-27 10:07  

	* [r2620] src/TimblAPI.cxx: formatting

2009-05-27 09:21  

	* [r2619] demos/api_test1.cxx, include/timbl/Instance.h,
	  src/GetOptClass.cxx, src/IGExperiment.cxx, src/Instance.cxx,
	  src/MBLClass.cxx, src/TimblExperiment.cxx: cleanup Metric stuff

2009-05-26 15:02  

	* [r2616] src/Timbl.cxx: attempt to fix the last leaks

2009-05-26 13:43  

	* [r2615] include/timbl/MBLClass.h, include/timbl/Options.h,
	  include/timbl/Types.h, src/GetOptClass.cxx, src/MBLClass.cxx,
	  src/Testers.cxx, src/TimblExperiment.cxx, src/Types.cxx: removed
	  DefaultOption stuff. metric options are handled more clearly now.

2009-05-26 13:42  

	* [r2614] include/timbl/TimblExperiment.h: added sanityCheck() to
	  IGExperiment. could be usefull for others too

2009-05-26 13:41  

	* [r2613] src/IGExperiment.cxx: moved common code to one function.
	  some more errors lead to a stop now, instead of changing
	  parameters and resuming

2009-05-25 15:03  

	* [r2604] include/timbl/Instance.h, include/timbl/Testers.h,
	  src/IBprocs.cxx, src/MBLClass.cxx, src/Testers.cxx,
	  src/TimblExperiment.cxx: cleaning up Metrics stuff.

2009-05-25 08:31  

	* [r2603] include/timbl/Testers.h: hmpf

2009-05-25 08:30  

	* [r2602] include/timbl/Testers.h: make gcc4.1 happy

2009-05-19 13:55  

	* [r2599] src/Instance.cxx, src/Testers.cxx: better

2009-05-19 12:27  

	* [r2598] src/Instance.cxx: removed assertion

2009-05-19 12:26  

	* [r2597] src/Timbl.cxx: fixed bug 25

2009-05-19 10:59  

	* [r2595] src/Instance.cxx: oesp

2009-05-19 09:53  

	* [r2594] include/timbl/GetOptClass.h, include/timbl/IBtree.h,
	  include/timbl/Instance.h, include/timbl/MBLClass.h,
	  include/timbl/Testers.h, src/GetOptClass.cxx, src/IBtree.cxx,
	  src/Instance.cxx, src/MBLClass.cxx, src/Testers.cxx,
	  src/TimblExperiment.cxx: a lot of Metrics cleanup

2009-05-13 14:52  

	* [r2592] include/timbl/Instance.h, include/timbl/MBLClass.h,
	  include/timbl/Testers.h, src/GetOptClass.cxx,
	  src/IGExperiment.cxx, src/Instance.cxx, src/MBLClass.cxx,
	  src/Testers.cxx, src/TimblExperiment.cxx: first step in factoring
	  out Metrics.
	  A lot to do!

2009-04-14 13:39  

	* [r2581] src/ServerProcs.cxx: now we make sure that logfile and
	  pidfile (when used) are ABSOLUTE filenames

2009-04-07 15:16  

	* [r2577] ChangeLog, include/timbl/Instance.h,
	  include/timbl/Testers.h, include/timbl/Types.h,
	  src/GetOptClass.cxx, src/Instance.cxx, src/Testers.cxx,
	  src/Types.cxx: first attempt to implement dice metric

2009-04-06 09:05  

	* [r2572] src/Timbl.cxx: removed confusing NS warning for
	  undocumented -Z option

2009-04-06 09:02  

	* [r2571] src/Timbl.cxx: added Server stuff to usage

2009-03-16 14:01  

	* [r2542] include/timbl/CommandLine.h, src/CommandLine.cxx: fixed
	  output off CommandLine (used for debugging mainly)

2009-03-10 16:00  

	* [r2531] configure.ac: hmm. that didn't work out. To many old
	  libtools around.

2009-03-10 15:48  

	* [r2530] configure.ac: attempt to improve libtool usage

2009-03-10 11:56  

	* [r2525] src/Statistics.cxx: fixed FScore and AUC calculations

2009-03-04 13:50  

	* [r2523] include/timbl/IBtree.h, src/IBtree.cxx, src/MBLClass.cxx,
	  src/TRIBLExperiments.cxx, src/TimblExperiment.cxx: - at last
	  fixed a wll known memory leak
	  - deleting an instancebase is done non-recursive at the top
	  level, in an attempt to fix exhaustive cache usage

2009-03-02 16:07  

	* [r2521] src/MBLClass.cxx: attempt to fix bug 21

2009-03-02 14:51  

	* [r2518] include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/CVExperiment.cxx,
	  src/Timbl.cxx, src/TimblAPI.cxx, src/TimblExperiment.cxx: fixed
	  the problem that -w <filename> and -u <filename> were ignored for
	  CV testing

2009-03-02 14:49  

	* [r2517] configure.ac: bumped version, because we add stuff to the
	  API

2009-02-18 16:31  

	* [r2496] src/TimblExperiment.cxx: don't show estimate if we passed
	  that line

2009-02-18 14:47  

	* [r2495] src/TimblExperiment.cxx: made 'configurable' IB2 hack

2009-02-18 12:25  

	* [r2494] src/TimblExperiment.cxx: reverted IB2 attempt to be
	  smart. Keeping fixes counting, though

2009-02-17 14:23  

	* [r2493] src/TimblExperiment.cxx: train with a threshold

2009-02-17 13:37  

	* [r2492] src/Instance.cxx, src/TimblExperiment.cxx: try to speed
	  up IB2

2009-02-17 11:30  

	* [r2491] src/TimblExperiment.cxx: fixed problem with counting of
	  IB2 additions

2009-02-16 16:07  

	* [r2490] src/TimblExperiment.cxx: this is it, i hope

2009-02-16 14:23  

	* [r2489] include/timbl/TimblExperiment.h, src/TimblExperiment.cxx:
	  and again improved

2009-02-16 14:18  

	* [r2488] include/timbl/TimblExperiment.h, src/TimblExperiment.cxx:
	  next attempt for better IB2 logging

2009-02-16 14:01  

	* [r2487] include/timbl/MBLClass.h, src/TimblExperiment.cxx: More
	  fixes for IB2 progress logging

2009-02-16 12:11  

	* [r2484] src/TimblExperiment.cxx: clumsy attemp to fic IB2

2009-02-16 10:38  

	* [r2483] src/TimblAPI.cxx: return something useless when failing.

2009-02-16 09:54  

	* [r2482] configure.ac, src/IGExperiment.cxx: fixed bug 17
	  (enhancement)
	  bumped to 6.1.6-beta

2009-02-09 15:10  

	* [r2474] configure.ac: bumoed version

2009-01-26 09:58  

	* [r2465] Makefile.am, bootstrap, m4: attempt to fix m4 stuff

2009-01-21 15:01  

	* [r2458] Makefile.am, configure.ac: Moderner

2009-01-07 15:40  

	* [r2431] configure.ac, demos/api_test1.cxx, demos/api_test2.cxx,
	  demos/api_test3.cxx, demos/api_test4.cxx, demos/api_test5.cxx,
	  demos/api_test6.cxx, demos/classify.cxx, demos/tse.cxx,
	  include/timbl/BestArray.h, include/timbl/Choppers.h,
	  include/timbl/CommandLine.h, include/timbl/Common.h,
	  include/timbl/GetOptClass.h, include/timbl/IBtree.h,
	  include/timbl/Instance.h, include/timbl/LogBuffer.h,
	  include/timbl/LogStream.h, include/timbl/MBLClass.h,
	  include/timbl/Matrices.h, include/timbl/MsgClass.h,
	  include/timbl/Options.h, include/timbl/ServerProcs.h,
	  include/timbl/SocketBasics.h, include/timbl/Statistics.h,
	  include/timbl/StringOps.h, include/timbl/Testers.h,
	  include/timbl/TimblAPI.h, include/timbl/TimblExperiment.h,
	  include/timbl/Tree.h, include/timbl/Trie.h,
	  include/timbl/Types.h, include/timbl/neighborSet.h,
	  src/BestArray.cxx, src/CVExperiment.cxx, src/Choppers.cxx,
	  src/CommandLine.cxx, src/Common.cxx, src/GetOptClass.cxx,
	  src/IBprocs.cxx, src/IBtree.cxx, src/IGExperiment.cxx,
	  src/Instance.cxx, src/LOOExperiment.cxx, src/LogBuffer.cxx,
	  src/LogStream.cxx, src/MBLClass.cxx, src/MsgClass.cxx,
	  src/ServerProcs.cxx, src/SocketBasics.cxx, src/Statistics.cxx,
	  src/StringOps.cxx, src/TRIBLExperiments.cxx, src/Testers.cxx,
	  src/Timbl.cxx, src/TimblAPI.cxx, src/TimblClient.cxx,
	  src/TimblExperiment.cxx, src/Tree.cxx, src/Types.cxx,
	  src/neighborSet.cxx: Bumped year

2008-12-02 14:20  sloot

	* [r2398] src/Instance.cxx: removed deadly line

2008-11-26 14:00  sloot

	* [r2388] src/TimblExperiment.cxx: the -vS option is used for
	  Test() also

2008-11-18 10:32  sloot

	* [r2366] src/Makefile.am: oesp

2008-11-12 15:19  sloot

	* [r2361] include/timbl/Metrics.h, src/Makefile.am,
	  src/Metrics.cxx: removed dead end

2008-11-04 16:56  sloot

	* [r2360] src/GetOptClass.cxx, src/Instance.cxx, src/MBLClass.cxx,
	  src/Testers.cxx: small changed to make life easier, I hope

2008-11-04 16:55  sloot

	* [r2359] include/timbl/Testers.h: aded GPL stuff

2008-11-04 16:55  sloot

	* [r2358] include/timbl/Types.h: added GPL stuff

2008-11-04 16:54  sloot

	* [r2357] src/Makefile.am: compile new Metrics class

2008-11-04 16:54  sloot

	* [r2356] include/timbl/Metrics.h, src/Metrics.cxx: start to
	  seperate Metrics also (no used yet)

2008-11-03 14:26  sloot

	* [r2354] include/timbl/Instance.h, include/timbl/MBLClass.h,
	  src/Instance.cxx, src/Testers.cxx, src/TimblExperiment.cxx: more
	  cleanup in metric handling

2008-10-29 16:32  sloot

	* [r2351] include/timbl/MBLClass.h,
	  include/timbl/TimblExperiment.h, include/timbl/neighborSet.h,
	  src/LOOExperiment.cxx, src/TRIBLExperiments.cxx,
	  src/TimblExperiment.cxx, src/neighborSet.cxx: cleanup in decay
	  stuff

2008-10-29 15:22  sloot

	* [r2350] include/timbl/MBLClass.h, include/timbl/Testers.h,
	  src/GetOptClass.cxx, src/MBLClass.cxx, src/Testers.cxx,
	  src/TimblExperiment.cxx: cleaned up metric stuff a bit

2008-10-28 16:25  sloot

	* [r2338] src/IBtree.cxx: changed statsTree output

2008-10-28 16:02  sloot

	* [r2337] include/timbl/Choppers.h, include/timbl/MBLClass.h,
	  src/Choppers.cxx, src/MBLClass.cxx: more cleanup

2008-10-28 14:24  sloot

	* [r2336] include/timbl/Choppers.h, src/Choppers.cxx,
	  src/MBLClass.cxx: more cleanup

2008-10-28 10:49  sloot

	* [r2335] include/timbl/Choppers.h, src/Choppers.cxx,
	  src/MBLClass.cxx: changed Choppers

2008-10-28 08:39  sloot

	* [r2334] include/timbl/Instance.h, src/Instance.cxx,
	  src/MBLClass.cxx: cleanup

2008-10-27 11:41  sloot

	* [r2333] src/Timbl.cxx: removed debug lien

2008-10-21 14:42  sloot

	* [r2324] AUTHORS: an extra contrubutor

2008-10-21 14:07  sloot

	* [r2323] src/IBtree.cxx: changed output of -IL option

2008-10-20 14:52  sloot

	* [r2322] configure.ac, src/ServerProcs.cxx: try to fix daemon()
	  stuff on IRIX.

2008-10-07 15:21  sloot

	* [r2320] include/timbl/IBtree.h, include/timbl/TimblAPI.h,
	  include/timbl/TimblExperiment.h, src/IBtree.cxx, src/Timbl.cxx,
	  src/TimblAPI.cxx, src/TimblExperiment.cxx: added experimental
	  code for a different tree output

2008-10-07 15:20  sloot

	* [r2319] src/GetOptClass.cxx: bug?

2008-10-01 16:17  sloot

	* [r2318] include/timbl/MBLClass.h, src/MBLClass.cxx: more banning
	  of C-style arrays

2008-10-01 16:01  sloot

	* [r2317] include/timbl/MBLClass.h, include/timbl/Testers.h,
	  src/IBprocs.cxx, src/IGExperiment.cxx, src/MBLClass.cxx,
	  src/TRIBLExperiments.cxx, src/Testers.cxx,
	  src/TimblExperiment.cxx: again eliminated a C array

2008-10-01 15:15  sloot

	* [r2315] src/MBLClass.cxx: numb change

2008-10-01 15:01  sloot

	* [r2314] include/timbl/GetOptClass.h, src/GetOptClass.cxx: more
	  refactoring

2008-10-01 08:29  sloot

	* [r2312] src/ServerProcs.cxx: added informational message

2008-09-30 15:50  sloot

	* [r2311] include/timbl/Choppers.h: small improvement again

2008-09-30 15:43  sloot

	* [r2310] include/timbl/Choppers.h, src/Choppers.cxx: small
	  refactoring

2008-09-30 13:28  sloot

	* [r2309] include/timbl/Choppers.h, src/Choppers.cxx,
	  src/MBLClass.cxx: cleaned Chopper class

2008-09-29 16:15  sloot

	* [r2308] include/timbl/Choppers.h, src/Choppers.cxx,
	  src/MBLClass.cxx: cleaned up Choppers

2008-09-23 14:44  sloot

	* [r2304] src/MBLClass.cxx, src/TimblExperiment.cxx: cleaner

2008-09-22 15:33  sloot

	* [r2299] src/MBLClass.cxx, src/TimblExperiment.cxx: fixed pronblem
	  with Chopppers, but not very neat. PLEASE reconsider!

2008-09-22 12:58  sloot

	* [r2298] include/timbl/Choppers.h, src/Choppers.cxx,
	  src/Makefile.am: moved Chopper code to separate .cxx file

2008-09-17 15:54  sloot

	* [r2297] include/timbl/BestArray.h, include/timbl/Instance.h,
	  src/Instance.cxx: ValueDistribution::size() renamed to
	  totalSize()
	  Added new size() function to return the size.

2008-09-17 14:18  sloot

	* [r2296] include/timbl/Choppers.h, include/timbl/MBLClass.h,
	  src/Instance.cxx, src/MBLClass.cxx, src/TimblExperiment.cxx:
	  attempt to make the choppers smarter.
	  not done yest

2008-09-15 15:46  sloot

	* [r2294] src/MBLClass.cxx: small clarification

2008-09-09 16:31  sloot

	* [r2289] src/Testers.cxx: small change

2008-09-09 16:13  sloot

	* [r2288] include/timbl/Testers.h, src/MBLClass.cxx,
	  src/Testers.cxx: more cleanup

2008-09-09 15:02  sloot

	* [r2287] include/timbl/IBtree.h, include/timbl/MBLClass.h,
	  include/timbl/Testers.h, src/IBtree.cxx, src/MBLClass.cxx,
	  src/Testers.cxx: code reshuffling and simplification

2008-09-08 14:51  sloot

	* [r2286] include/timbl/MBLClass.h, include/timbl/Testers.h,
	  src/MBLClass.cxx, src/Makefile.am, src/Testers.cxx: made separate
	  Testers.cxx ans started to demangle testing stuff

2008-08-20 17:03  sloot

	* [r2282] src/MBLClass.cxx: fixed a problem

2008-08-20 16:37  sloot

	* [r2281] include/timbl/MBLClass.h, src/MBLClass.cxx,
	  src/TimblExperiment.cxx: major code reshuffling. Not ready yet.

2008-08-19 15:06  sloot

	* [r2280] src/MBLClass.cxx: incremented maximum value for PROGRESS

2008-08-19 14:14  sloot

	* [r2276] src/StringOps.cxx: hmm. CodeToStr should accept free '\'
	  as well

2008-08-19 12:56  sloot

	* [r2275] src/StringOps.cxx: fixed last fix

2008-08-19 12:39  sloot

	* [r2273] src/StringOps.cxx: fixed problem with iterator running of
	  at end

2008-08-18 14:03  sloot

	* [r2271] include/timbl/Instance.h, src/IBtree.cxx,
	  src/Instance.cxx: small code inprovements

2008-08-12 13:56  sloot

	* [r2265] configure.ac: fixed configuration.
	  Now you can set CXXFLAGS at configuretime to override the
	  defaults

2008-08-11 13:38  sloot

	* [r2261] configure.ac, src/Common.cxx, src/Instance.cxx,
	  src/MBLClass.cxx: satisfy icpc's -Wcheck compiler option. (-Wall
	  is unwise)

2008-08-06 13:27  sloot

	* [r2258] src/MBLClass.cxx: countFeatures may not be declared
	  inline!

2008-07-14 13:42  sloot

	* [r2247] ChangeLog: modified after reinstall

2008-07-14 12:08  sloot

	* [r2229] .: moved

2008-07-14 09:43  sloot

	* [r2224] - cleaned up old chop code
	  - removed max_prod parameter in test*ex() functions, it was a
	  constant

2008-07-09 14:37  sloot

	* [r2222] oesp

2008-07-09 14:03  sloot

	* [r2221] added Chopper class

2008-07-08 13:21  sloot

	* [r2218] fixed leak

2008-07-08 13:03  sloot

	* [r2217] replaced functionpointers for testing features by a
	  testclass.

2008-07-07 15:47  sloot

	* [r2214] made ExactMatch() function simpler

2008-07-07 12:24  sloot

	* [r2213] removed unused code

2008-07-01 09:51  sloot

	* [r2205] removed unused function declarartion

2008-06-24 15:57  sloot

	* [r2203] some cleanup.
	  made SparseSymetricMatrix a template.

2008-06-23 14:43  sloot

	* [r2198] made gcc 4.3 shut up:
	  - fixed missing includes
	  - added explanatory brackets

2008-06-11 12:26  sloot

	* [r2175] fixed unitialized variable that made servermode crash

2008-05-28 10:34  sloot

	* [r2158] - bumped version
	  - replaced cvs2cl by svn2cl

2008-05-28 09:05  sloot

	* [r2157] added code to be able to split an experiment. fixes
	  trouble with Dimbl.

2008-04-22 13:10  sloot

	* [r2094] removed evil exit()'s

2008-04-16 14:42  sloot

	* [r2088] changed behaviour (but didn't break any of out tests...)
	  improved implemenation

2008-04-15 14:05  sloot

	* [r2082] README2 was gone

2008-04-15 12:54  sloot

	* [r2079] back to one README

2008-04-15 12:53  sloot

	* [r2078] extended API

2008-04-15 12:53  sloot

	* [r2077] added some morer usefull functions

2008-04-15 12:50  sloot

	* [r2076] don't install demos

2008-04-15 12:49  sloot

	* [r2075] name was changed!

2008-04-14 12:03  sloot

	* [r2070] to ignore

2008-04-14 12:03  sloot

	* [r2069] renamed timblserver.in to timbl.in

2008-04-10 18:29  joostvb

	* [r2063] do not install demos in /usr/local/bin, but in
	  /usr/local/libexec/timbl : do not clutter the namespace of
	  binaries

2008-04-10 11:05  joostvb

	* [r2056] add sh-bang, in order to make this sciript executable on
	  unix-like OSes

2008-04-08 14:56  sloot

	* [r2045] make sure that directories exist and are writable for
	  $USER

2008-04-08 14:38  sloot

	* [r2044] code also works again for non GETADDRINFO case

2008-04-08 14:37  sloot

	* [r2043] oeps, debug lines!

2008-04-08 14:13  sloot

	* [r2042] to ignore

2008-04-08 13:09  sloot

	* [r2041] implemented restart

2008-04-08 12:21  sloot

	* [r2040] works now

2008-04-08 12:21  sloot

	* [r2039] added options to set logfile and pidfile for server mode

2008-04-08 08:22  sloot

	* [r2038] starting to implement start-stop scripts for init.d

2008-04-07 14:53  sloot

	* [r2035] removed signal handlers.
	  We want to be able to SIGHUP the server.

2008-04-02 15:53  sloot

	* [r2028] fixed neighborSet stuff.
	  Adpated api_test5 to changed behaviour of neigborSet

2008-04-02 15:04  sloot

	* [r2026] added outputstate flags to neighbor sets

2008-04-02 08:22  sloot

	* [r2023] fixed memory leak

2008-04-01 14:19  sloot

	* [r2022] changed API to make it possible for several
	  TimblExperiments to share MVDM matrices

2008-03-25 17:18  sloot

	* [r2011] and reverted again

2008-03-25 09:48  sloot

	* [r2010] new attempt

2008-03-19 15:36  sloot

	* [r2002] reverted previous update, because it was not helpfull (to
	  say the least)

2008-03-19 14:34  sloot

	* [r2001] attempt to make IG traing faster. To no avail is seems

2008-03-18 10:47  sloot

	* [r1998] added ignores

2008-03-18 10:32  sloot

	* [r1996] demos should use libtool also

2008-03-18 09:21  sloot

	* [r1993] added Libtool stuff
	  bumped version

2008-03-17 13:31  sloot

	* [r1991] oops, too much babling

2008-03-17 13:05  sloot

	* [r1990] - fixed compiler warning
	  - added code to 'compress' idexes for IG tree testing. doesn't
	  help much?
	  needed adaptation to Merge() also

2008-03-05 10:43  sloot

	* [r1980] Bumped version for release

2008-03-04 15:12  sloot

	* [r1978] changed error message

2008-03-04 15:11  sloot

	* [r1977] al lot of problems shouldn't a priori invalidate the
	  experiment

2008-03-04 15:10  sloot

	* [r1976] changed logic

2008-03-04 15:09  sloot

	* [r1975] problems with reading Weights now lead to termination

2008-03-03 09:02  sloot

	* [r1971] prefer small memory leak over crash :{

2008-02-20 15:41  sloot

	* [r1958] fixed memory leak.
	  cleanup

2008-02-20 15:41  sloot

	* [r1957] cleanup

2008-02-20 15:37  sloot

	* [r1956] fixed memory leak for CV testing

2008-02-20 14:36  sloot

	* [r1955] oeps. parameters reversed

2008-02-20 12:44  sloot

	* [r1952] igTreshold can now be set with -Treshold=<n>

2008-02-19 16:33  sloot

	* [r1946] quick fix for confusion info in LOO. needs checking!

2008-02-19 15:57  sloot

	* [r1945] cleanup.

2008-02-19 14:44  sloot

	* [r1944] fixed progress output

2008-02-19 14:27  sloot

	* [r1943] added attempt for extra level in IG training

2008-02-06 14:44  sloot

	* [r1931] attempt to clear up more code

2008-02-05 15:46  sloot

	* [r1930] to ignore ;)

2008-02-05 15:12  sloot

	* [r1929] new entries!

2008-02-05 15:08  sloot

	* [r1928] moved functionality from MBLclass to a separate BestArray
	  class.

2008-01-29 15:53  sloot

	* [r1924] MBLclass split up (a little bit)
	  try to clean up all that test_instance* mess
	  did some function renaming also.

2008-01-29 10:39  sloot

	* [r1922] moved common code into Init/Next GraphTest

2008-01-29 10:38  sloot

	* [r1921] added classify options to tse

2008-01-28 10:34  sloot

	* [r1918] removed unused function

2008-01-23 16:09  sloot

	* [r1915] more refactoring
	  also added new files

2008-01-23 15:48  sloot

	* [r1914] bumped year

2008-01-23 15:37  sloot

	* [r1913] started refactoring of TimblExperiment to reduce module
	  size.

2008-01-22 15:21  sloot

	* [r1909] timbl.pc must be distributed also

2008-01-22 11:07  sloot

	* [r1906] attempt to add pkg-config support

2008-01-21 14:51  sloot

	* [r1901] fixed -O output path handling for CrossValidation test

2008-01-21 14:50  sloot

	* [r1900] changed output formatting

2008-01-21 10:17  sloot

	* [r1898] fixed initializing in the API

2008-01-14 14:33  sloot

	* [r1896] more code reshuffling. still trying to make things less
	  convoluted

2008-01-09 15:54  sloot

	* [r1891] Bumped minor version.
	  changed logic porblem in *options_ok() functions

2008-01-09 14:20  sloot

	* [r1889] added a StatisticsClass to collect our statistics

2008-01-09 10:18  sloot

	* [r1888] confusion is a TimblExperiment member

2008-01-08 16:45  sloot

	* [r1887] hmmm, is this improvement?

2008-01-08 12:50  sloot

	* [r1885] next cleanup step

2008-01-08 11:14  sloot

	* [r1884] and more cleanup

2008-01-08 09:56  sloot

	* [r1883] small cleanup

2008-01-07 16:03  sloot

	* [r1882] next small step

2008-01-07 13:27  sloot

	* [r1881] next step: some code reshuffling to get things more clear

2007-12-31 08:55  antalb

	* [r1875] updated AUTHORS file

2007-12-30 21:50  antalb

	* [r1874] moved Walter to authors

2007-12-20 08:33  sloot

	* [r1872] New files

2007-12-18 15:36  sloot

	* [r1871] started code reshuffling to make Advanced Statistics and
	  Confusion Matrix
	  a "first class citizen" of MBLClass. so, that these statistics
	  can be extracted
	  using the API.
	  A lot to do still.

2007-12-18 15:20  sloot

	* [r1870] rollback of unicode stuff

2007-12-18 13:52  sloot

	* [r1869] now it's working again, i think

2007-12-18 13:42  sloot

	* [r1868] oesp

2007-12-18 12:49  sloot

	* [r1867] replace string array by list<string>

2007-12-18 11:26  sloot

	* [r1866] added tests to check all input and output files asap, to
	  avoid waiting 5
	  minutes to read a tree, and then bail out because of a missing
	  weight file

2007-12-18 09:12  sloot

	* [r1864] no ICU check needed in configure.ac

2007-12-18 09:09  sloot

	* [r1863] rolled back unicode stuf. Timbl is already quite good at
	  it!

2007-12-17 15:54  sloot

	* [r1861] added LATIN1 --> UTF8 conversion

2007-12-17 14:06  sloot

	* [r1860] new code

2007-12-17 14:02  sloot

	* [r1859] added encoding option. Not functional yet

2007-12-11 15:32  sloot

	* [r1849] last minute fix. missing include in SocketBasics.cxx
	  makes TimblClient fail!

2007-12-10 13:46  sloot

	* [r1843] getting ready for release!

2007-12-10 11:42  sloot

	* [r1839] New manuals

2007-12-04 09:48  sloot

	* [r1821] configure seems desperate in need for this.

2007-12-03 11:18  sloot

	* [r1804] oeps. distcheck failed

2007-12-03 11:05  sloot

	* [r1803] minor additions

2007-12-03 11:05  sloot

	* [r1802] is autogenerated now

2007-12-03 11:04  sloot

	* [r1801] added conditional cvs2cl call to generate ChangeLog

2007-12-03 10:21  sloot

	* [r1800] small updates

2007-12-03 10:05  sloot

	* [r1799] data files are correctly installed now

2007-11-28 10:10  sloot

	* [r1790] added a "C" symbol timbl_present to satisfy autotools for
	  non gnu compilers

2007-11-28 09:22  sloot

	* [r1788] moved line

2007-11-28 09:22  sloot

	* [r1787] mabi=64 test only fot g++

2007-11-26 16:18  sloot

	* [r1786] made it work for IBM C++

2007-11-26 16:05  sloot

	* [r1785] oeps. only look in our own dirs please

2007-11-26 13:45  sloot

	* [r1780] cleaned up build system

2007-11-26 12:38  sloot

	* [r1779] fixed dependency on libTimbl and -mabi=64 build

2007-11-20 11:39  sloot

	* [r1773] added test for working -mabi=64 compiler flag

2007-11-13 15:11  sloot

	* [r1772] fixed small int vs. unsigned int problems

2007-11-13 15:10  sloot

	* [r1771] added beta to version

2007-11-06 14:09  sloot

	* [r1762] to ignore more

2007-11-06 14:07  sloot

	* [r1761] hmm. quite a mess with README's

2007-11-06 11:55  sloot

	* [r1757] not needed in CVS

2007-11-06 11:50  sloot

	* [r1756] added docs dir to install and dist

2007-10-18 07:53  sloot

	* [r1723] quick fix. TopDistribution should always be there, I
	  think. Fixes bug in serverMode

2007-10-15 10:12  sloot

	* [r1708] typo

2007-10-15 10:12  sloot

	* [r1707] now we use Version info from config.h (aka auto tools)

2007-10-10 07:23  sloot

	* [r1706] first attempt to make a good list

2007-10-10 07:04  sloot

	* [r1705] typos changed

2007-10-09 08:59  sloot

	* [r1689] When an intel compiler is there, we prefer that

2007-10-09 08:58  sloot

	* [r1688] fixed terrible mistake

2007-10-08 12:03  sloot

	* [r1683] autotools 1.8 seems ok

2007-10-03 10:09  sloot

	* [r1663] default is now to build a server

2007-10-03 07:55  sloot

	* [r1657] more to ignore

2007-10-03 07:54  sloot

	* [r1656] removed Makefile
	  changed bootstrap to test for automake and aclocal versions

2007-10-02 14:39  sloot

	* [r1655] tsja

2007-10-02 14:30  sloot

	* [r1654] oesp

2007-10-02 14:24  sloot

	* [r1653] fixed up .cvsignore's

2007-10-02 14:22  sloot

	* [r1652] and more

2007-10-02 14:18  sloot

	* [r1651] changed

2007-10-02 14:15  sloot

	* [r1650] major reshuffle for packaging

2007-09-25 14:57  sloot

	* [r1637] fixed topCache usage, i hope

2007-09-25 13:58  sloot

	* [r1636] added result Class that can normalize and beam and caches
	  topDistribution results

2007-09-19 15:58  sloot

	* [r1633] small improvement, i think

2007-09-19 15:41  sloot

	* [r1632] next attempt

2007-09-19 15:26  sloot

	* [r1631] hmm, attempt to fix Beam output for ValueDistributions

2007-09-19 15:05  sloot

	* [r1630] attempt to avoid needless copies. NOT realy debunked!

2007-09-10 07:50  sloot

	* [r1625] updated usage().
	  added try{} block tot GetOptClass

2007-09-03 13:07  sloot

	* [r1611] removed strange parameter from time_stamp()

2007-08-27 13:30  sloot

	* [r1606] replaced abort() by throw() generally

2007-08-08 20:29  antalb

	* [r1591] Turned it into 6.0(Release) - note the capital R

2007-08-08 13:54  sloot

	* [r1589] fixed a big hole. (only when -silly and +vn was active)

2007-08-08 13:53  sloot

	* [r1588] fixed small leak

2007-08-08 12:04  sloot

	* [r1587] bumped version

2007-08-08 12:04  sloot

	* [r1586] fixed memory leak

2007-08-08 12:03  sloot

	* [r1585] fixed a memory leak.
	  also better react on exception in read_distribution()

2007-08-08 11:57  sloot

	* [r1584] eeek

2007-07-11 19:13  antalb

	* [r1522] replaced Timbl manual; added API guide; removed the two
	  pdfs that should go
	  with Mbt3 instead

2007-07-11 15:03  sloot

	* [r1519] last fix ...

2007-07-11 13:36  sloot

	* [r1517] match the docs ;)

2007-07-11 09:17  sloot

	* [r1515] smaal improvement. i hope

2007-07-11 09:09  sloot

	* [r1514] removed 1 line

2007-07-10 15:46  sloot

	* [r1513] added api_test6 and modified test5

2007-07-10 15:44  sloot

	* [r1512] made output of Vfield global. Uses Vfield.put() which now
	  prints al
	  entries using the weight.

2007-07-10 14:05  sloot

	* [r1511] more docs

2007-07-10 13:48  sloot

	* [r1509] numb change

2007-07-10 11:40  sloot

	* [r1504] API cleanup

2007-07-10 09:55  sloot

	* [r1503] added tests for neigborSets

2007-07-09 13:18  sloot

	* [r1493] added docs

2007-07-09 10:47  sloot

	* [r1491] seems to have cleared dot-product and cosine hassle

2007-07-09 09:10  sloot

	* [r1488] more GPL 3.0 changes

2007-07-09 08:34  sloot

	* [r1486] GPL 3.0

2007-07-09 08:17  sloot

	* [r1485] GPL 3.0 licence

2007-07-03 14:34  sloot

	* [r1478] fixed innerproduct and cosine metric. I hope

2007-07-03 10:47  sloot

	* [r1476] solved linker problems

2007-07-03 10:06  sloot

	* [r1475] attempt to circumvent linker errors

2007-07-03 07:59  sloot

	* [r1473] reshuffled

2007-07-02 14:37  sloot

	* [r1472] ULONG max is NOT a reliable maximum for size_t. Replace
	  by
	  std::numeric_limits<size_t>::max()

2007-07-02 12:50  sloot

	* [r1471] changed indexing of ValueClass. start with 1, 0 ==
	  'unknown'

2007-06-27 21:10  sloot

	* [r1470] removed debug lines

2007-06-27 21:06  sloot

	* [r1469] last try

2007-06-27 20:51  sloot

	* [r1468] hmm, try to fix

2007-06-27 20:34  sloot

	* [r1467] desperate

2007-06-27 19:40  sloot

	* [r1466] fixed trailing dot problem i hope

2007-06-27 17:23  sloot

	* [r1464] fiddled a lot with templates

2007-06-26 10:31  sloot

	* [r1463] small 64 bit fix

2007-06-26 10:31  sloot

	* [r1462] lots off template stuff added

2007-06-19 15:00  sloot

	* [r1460] more generic

2007-06-19 14:47  sloot

	* [r1459] next step

2007-06-19 14:05  sloot

	* [r1458] use more templates!

2007-06-19 11:13  sloot

	* [r1457] fix 64 bits

2007-06-19 10:44  sloot

	* [r1456] cleanup

2007-06-19 10:40  sloot

	* [r1455] add hack

2007-06-19 10:38  sloot

	* [r1454] almost there, i hope

2007-06-19 10:17  sloot

	* [r1453] and?

2007-06-19 10:03  sloot

	* [r1452] the story continues

2007-06-19 09:54  sloot

	* [r1451] changed signatures

2007-06-19 09:54  sloot

	* [r1450] changed signature

2007-06-19 09:53  sloot

	* [r1449] forgotten one

2007-06-19 09:53  sloot

	* [r1448] more

2007-06-19 09:52  sloot

	* [r1447] damn

2007-06-19 09:39  sloot

	* [r1446] hack

2007-06-19 09:33  sloot

	* [r1445] next attempt

2007-06-19 08:45  sloot

	* [r1444] try to fix more

2007-06-19 08:31  sloot

	* [r1443] oesp

2007-06-19 08:15  sloot

	* [r1442] and one more

2007-06-19 08:11  sloot

	* [r1441] one more

2007-06-18 16:17  sloot

	* [r1435] and more

2007-06-18 16:05  sloot

	* [r1434] ...

2007-06-18 15:41  sloot

	* [r1433] still more

2007-06-18 15:22  sloot

	* [r1432] it's hard

2007-06-18 14:47  sloot

	* [r1431] and more...

2007-06-18 14:12  sloot

	* [r1430] and more

2007-06-18 14:01  sloot

	* [r1429] sigh

2007-06-18 13:26  sloot

	* [r1428] more to do

2007-06-18 13:06  sloot

	* [r1427] and more...

2007-06-18 12:55  sloot

	* [r1426] lots of 64 bit stuff

2007-06-18 10:57  sloot

	* [r1425] try this

2007-06-18 10:53  sloot

	* [r1424] small fixes

2007-06-18 10:32  sloot

	* [r1423] oesp

2007-06-18 10:29  sloot

	* [r1422] new attempt for precision et. al.

2007-06-18 09:50  sloot

	* [r1421] and more 64 bits stuff

2007-06-18 09:32  sloot

	* [r1420] and more 64-bit hassle

2007-06-18 09:04  sloot

	* [r1419] 64 bit fix

2007-06-18 08:38  sloot

	* [r1418] and more

2007-06-18 08:32  sloot

	* [r1417] more 64-bit enhancements

2007-06-13 15:21  sloot

	* [r1415] changed signature to satisfy Intel compiler

2007-06-13 15:17  sloot

	* [r1414] help teh Intel compiler shut up

2007-06-13 15:11  sloot

	* [r1412] small type problem

2007-06-13 15:07  sloot

	* [r1411] improved error handling

2007-06-13 14:18  sloot

	* [r1410] oesp

2007-06-13 14:15  sloot

	* [r1409] getting closer

2007-06-13 14:09  sloot

	* [r1408] and more...

2007-06-13 14:02  sloot

	* [r1407] more 64 bit stuff

2007-06-13 13:52  sloot

	* [r1405] fixed

2007-06-13 13:44  sloot

	* [r1404] fixed problem with look_ahead()

2007-06-13 12:29  sloot

	* [r1403] fixed visability

2007-06-13 12:28  sloot

	* [r1402] changed type

2007-06-13 12:22  sloot

	* [r1401] gcc wants this

2007-06-13 12:22  sloot

	* [r1400] oesp

2007-06-13 12:08  sloot

	* [r1399] some fixes to satisfy Intel compiler. Nor ready yet

2007-06-13 12:07  sloot

	* [r1398] make Intel compiler happy

2007-06-13 09:28  sloot

	* [r1397] more generic

2007-06-13 08:58  sloot

	* [r1396] g++ is de default of course

2007-06-13 08:51  sloot

	* [r1395] cleaned up Makefiles

2007-06-12 09:39  sloot

	* [r1393] cleanup

2007-06-12 09:32  sloot

	* [r1392] to ignore

2007-06-12 09:17  sloot

	* [r1391] cleanup finished

2007-06-12 09:10  sloot

	* [r1390] cleanup

2007-06-12 09:06  sloot

	* [r1389] testfiles

2007-06-12 09:02  sloot

	* [r1388] ignore some stuff

2007-06-12 08:59  sloot

	* [r1387] demos

2007-06-12 08:24  sloot

	* [r1385] improved branching info layout

2007-06-11 14:57  sloot

	* [r1379] Initial revision

