ontology: EDAM (1.33)
topic:
  - Sequence analysis
scopes:
  - name: summary
    function:
      - Genome alignment
    inputs:
      - data: Raw sequence
        formats:
          - FASTQ
      - data: DNA sequence (raw)
        formats:
          - FASTA
      - data: Genome annotation
        formats:
          - GTF
    outputs:
      - data: Sequence alignment (nucleic acid)
        formats:
          - SAM
          - BAM
      - data: Report
