# ===========================================================================
#
#                            PUBLIC DOMAIN NOTICE
#               National Center for Biotechnology Information
#
#  This software/database is a "United States Government Work" under the
#  terms of the United States Copyright Act.  It was written as part of
#  the author's official duties as a United States Government employee and
#  thus cannot be copyrighted.  This software/database is freely available
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#
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# ===========================================================================

default: runtests

TOP ?= $(abspath ../..)

MODULE = test/ngs-python

ALL_TARGS = \

include $(TOP)/build/Makefile.env


# make sure runs are not cached in the user repository when running tests
ifeq ($(wildcard ../../../asm-trace),)
	ifeq (,$(VDB_CONFIG))
		VDB_CONFIG = $(shell pwd)/../only-remote-repository.kfg
	endif
endif


#-------------------------------------------------------------------------------
# runtests
#
runtests: pytest

pytest:
	python -c "from ngs import NGS" \
		&& export VDB_CONFIG=$(VDB_CONFIG) ; export NGS_PY_DOWNLOAD_LIBRARY=0; \
			unset NGS_PY_LIBRARY_PATH; \
			export LD_LIBRARY_PATH=$(LIBDIR):$(NGS_LIBDIR):$$LD_LIBRARY_PATH; \
			NCBI_SETTINGS=/ python tests.py \
		|| echo "NGS Python tests are not run since ngs module does not appear to be installed"

.PHONY: pytest
