"Previous Section"_Performance.html - "LAMMPS WWW Site"_lws -
"LAMMPS Documentation"_ld - "LAMMPS Commands"_lc - "Next
Section"_Examples.html :c

:link(lws,http://lammps.sandia.gov)
:link(ld,Manual.html)
:link(lc,Commands.html#comm)

:line

Howto discussions :h2

These doc pages describe how to perform various tasks with LAMMPS,
both for users and developers.  The
"glossary"_http://lammps.sandia.gov website page also lists MD
terminology with links to corresponding LAMMPS manual pages.  The
example input scripts included in the examples dir of the LAMMPS
distribution and highlighted on the "Examples"_Examples.html doc page
also show how to setup and run various kinds of simulations.

Tutorials howto :h3

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   :name: tutorials
   :maxdepth: 1

   Howto_github
   Howto_pylammps
   Howto_bash

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"Using GitHub with LAMMPS"_Howto_github.html
"PyLAMMPS interface to LAMMPS"_Howto_pylammps.html
"Using LAMMPS with bash on Windows"_Howto_bash.html :all(b)

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General howto :h3

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.. toctree::
   :name: general_howto
   :maxdepth: 1

   Howto_restart
   Howto_viz
   Howto_multiple
   Howto_replica
   Howto_library
   Howto_couple
   Howto_client_server

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"Restart a simulation"_Howto_restart.html
"Visualize LAMMPS snapshots"_Howto_viz.html
"Run multiple simulations from one input script"_Howto_multiple.html
"Multi-replica simulations"_Howto_replica.html
"Library interface to LAMMPS"_Howto_library.html
"Couple LAMMPS to other codes"_Howto_couple.html
"Using LAMMPS in client/server mode"_Howto_client_server.html :all(b)

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Settings howto :h3

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.. toctree::
   :name: settings
   :maxdepth: 1

   Howto_2d
   Howto_triclinic
   Howto_thermostat
   Howto_barostat
   Howto_walls
   Howto_nemd
   Howto_dispersion

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"2d simulations"_Howto_2d.html
"Triclinic (non-orthogonal) simulation boxes"_Howto_triclinic.html
"Thermostats"_Howto_thermostat.html
"Barostats"_Howto_barostat.html
"Walls"_Howto_walls.html
"NEMD simulations"_Howto_nemd.html
"Long-range dispersion settings"_Howto_dispersion.html :all(b)

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Analysis howto :h3

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.. toctree::
   :name: analysis
   :maxdepth: 1

   Howto_output
   Howto_chunk
   Howto_temperature
   Howto_elastic
   Howto_kappa
   Howto_viscosity
   Howto_diffusion

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"Output from LAMMPS (thermo, dumps, computes, fixes, variables)"_Howto_output.html
"Use chunks to calculate system properties"_Howto_chunk.html :all(b)
"Calculate temperature"_Howto_temperature.html
"Calculate elastic constants"_Howto_elastic.html
"Calculate thermal conductivity"_Howto_kappa.html
"Calculate viscosity"_Howto_viscosity.html
"Calculate a diffusion coefficient"_Howto_diffusion.html :all(b)

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Force fields howto :h3

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.. toctree::
   :name: force
   :maxdepth: 1

   Howto_bioFF
   Howto_tip3p
   Howto_tip4p
   Howto_spc

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"CHARMM, AMBER, COMPASS, and DREIDING force fields"_Howto_bioFF.html
"TIP3P water model"_Howto_tip3p.html
"TIP4P water model"_Howto_tip4p.html
"SPC water model"_Howto_spc.html :all(b)

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Packages howto :h3

<!-- RST

.. toctree::
   :name: packages
   :maxdepth: 1

   Howto_spherical
   Howto_granular
   Howto_body
   Howto_polarizable
   Howto_coreshell
   Howto_drude
   Howto_drude2
   Howto_manifold
   Howto_spins

END_RST -->


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"Finite-size spherical and aspherical particles"_Howto_spherical.html
"Granular models"_Howto_granular.html
"Body style particles"_Howto_body.html
"Polarizable models"_Howto_polarizable.html
"Adiabatic core/shell model"_Howto_coreshell.html
"Drude induced dipoles"_Howto_drude.html
"Drude induced dipoles (extended)"_Howto_drude2.html
"Manifolds (surfaces)"_Howto_manifold.html
"Magnetic spins"_Howto_spins.html :all(b)

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