#!/bin/sh
# autopkgtest check: Run simple test data through Roary 
# Author: Sascha Steinbiss <satta@debian.org>
set -e

ORIGDIR=$(pwd)
DATADIR=$ORIGDIR/t/data/genbank_gbff
WORKDIR=$(mktemp -d)

trap "rm -rf $WORKDIR" 0 INT QUIT ABRT PIPE TERM
cd $WORKDIR

cp $DATADIR/*.gff .
roary -f out *.gff

[ -d out ]

find out | LC_ALL=C sort | diff - $ORIGDIR/debian/tests/expected_files.out
