#!/bin/sh -e

biocname=snpStats
pkg=r-bioc-`echo $biocname | tr [A-Z] [a-z]`

if [ "$ADTTMP" = "" ] ; then
  ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
fi
cd $ADTTMP
cp /usr/share/doc/$pkg/examples/vignettes/* $ADTTMP
gunzip *.gz
for rnw in *.Rnw ; do
rfile=`basename $rnw nw`
R --no-save <<EOT
  Stangle("$rnw")
  source("$rfile", echo=TRUE)
EOT
done

